Transcript Information: S_Transcript_97401.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value3E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.630026345043
Replicate 225.482673261217
Replicate 321.250889314437
Condition 2: 8 Hour
Replicate 131.446906160381
Replicate 217.032065836829
Replicate 316.228114431776
Condition 3: 24 Hour
Replicate 17.2516622835717
Replicate 229.503370625451
Replicate 314.91179854404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97401.p1 GENE.S_Transcript_97401~~S_Transcript_97401.p1 ORF type:complete len:729 (+),score=128.66,SEO_N|PF14576.2|8.8e-88,SEO_C|PF14577.2|4.1e-87 S_Transcript_97401:121-2307(+)
ATGGCAAATATTAACTCAAACCCTGCGAACTCAACACCAAATCTACAAAAGAGCTTCAGCAACATTAGTATTACTATTAATAACAAATTACCGAAAGTTTCCTACGATGACTTGAAAATCATCAAGGATATTCAATCAAGCCATGCTCATGACGCCCGTCAAGTCAACGTCAAACCTGTTCTTGATGTCGTTGAGGACATCCTCCTTCGTTCCCAGCATACCACCCTTGCTGATTTCATTGAGACGGGACATGATGACACTGATGCTGTGAATGTGTTGGAGGAAAAAATGGGAGGAGCAGCTGCAGGTGCTAAAGGCACAATGCTTGAAGAATTAGCCATAGCCATACAGAAAGTTTGCTGTGAGTTTACATGCAAATGCGCAGCAGGAGATGGGCATGCATCAGCAATGGCAATCCTGAACGCAGTAGGGAGCTACTCATGGGATGTCAAGGTGGTGATAGCATTGGCAGCCTTTGCAGTGACTTATGGAGAGCTCTGGCTTGTCATTCACCAATACACCACGAACCCATTGGCTCGATCAATTGCTGTGCTCAAGCAAACACCTGAGAATAGTGAGATTAACGGGGTTCTCAAATCCAAATTTGGTGACTTTAATCATCTTACTAAGCTCTTGGTTGAAGTTTCCAAGACCCTCATTGACTTCAGGCTTTTGCCTTCTAAGTACATTACTCCTGAGGATCCACCCTTGTCTAATGCTATGAACCACATTGCTAGTGCCTCTTATTGGGCTATTCGCGCTATTGTTGCTTGTGGTGCTCAGATTGTTAACATTGGCATCACTTCTGGGTTGATTGGGTCAGCTACAGAGGCTTGGGACCTTTCGAGCTTGTCACATAAAGTCCAGACCATACATGAACAACTTGTGCAACGGCTTACTATTTGCTATGAATTCATAGGGGAGAAAAAAAATGAGGAGGCATACAACAATCTAATACTACTGTTCAAGACACCCCAAAAGGACAATGTGAAGATCCTCAAGACACTAATCTATGCAAGCAATGACATGCATCCTCTTGTGGAAGTCTCTACCAAGAAACGGGTCCACATTGATATTCTTAGAGGCAAGACAGTGCTGCTATTCATCTCGGACCTTGATGTGTCCGAGGAAGAGCTCATGGTCCTCAAGAGGATCTACGAGTCGAGGAAGAACAAGAATGAGCATCAGTATGAGATCGTTTGGATTCCAGTAGTAGACAGGACTATGGTTACATGGACCAGGGAAGATGAAAACAAGTTCAAGAGCTTGCAATGCAAGATGCCTTGGTACACTTTGTTCCACCATTCATTGCTTAGCCCTGTTTCTATAAGGTATATCAAGGAGGTGTGGGGATTTGTGAAGAAGCAAATCGTTGTGGCATTGGACCAAACGGGCAAAGTCGTAAGCCAAAATGCTCTTCATACGATGCTTATTTGGGGTAACTTGGCTTATCCTTTCACCACTCACAAGGAAGAGGAGCTTTGGAAGAAACAGACTTGGAGCCTTGACTTTGTTCTTGATTCCATTCATCCCGAAATCCCCAAATGGCTTGCACAAGGGGATGTCAACATATGCTTGTTTGGAGGGGAGGACATAGAATGGATCCGCAAATACACAAACTCCATGAAAGATCACGCCAAGACATCAAAAATCAAGCTGGAGTTAATCTATGTAGGAAAACACAACGCCAAGGAGGCAGTCAAGAAGATCATGGCAACCATCAACTCTGAAAAACTGGCTCACACCTTACCTGACATGACCAATGTCTGGTACTTCTGGACCCGCCTAGAGTCGATCCTCTACTCCAAGATGCACCATGGCAAGAATGTGAGCAATGACGAGATAGTCAAGGAAGTCATGTCGGTAATGAGCTTTGATGGGGGTGATCAAGGGTGGGGACTCATCGGAAGGGGATCAGCCCAGACAGAGATCATCAAGGGAAAGGGGGATTTGATCCTGCACACTTTTTCCAAGATGAAGGAATGGGAAGTAAACGTAGGAAAACTCGGGTTTTTGGGTGCTTTTCAGGAGCATCTTAAGTCCCTATTCGGGTCATCCAGCACTCATCATTGCAACCGTCTTGTGTTGCCAGCCATCGAAGGTGCAGGTGCCCCCTCTGTTGTTGCTTGTGCTGATTGTGGCCGTCCTATGGACAAGTACATCCTCTACCGCTGTTGCACTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97401.p1 GENE.S_Transcript_97401~~S_Transcript_97401.p1 ORF type:complete len:729 (+),score=128.66,SEO_N|PF14576.2|8.8e-88,SEO_C|PF14577.2|4.1e-87 S_Transcript_97401:121-2307(+)
MANINSNPANSTPNLQKSFSNISITINNKLPKVSYDDLKIIKDIQSSHAHDARQVNVKPVLDVVEDILLRSQHTTLADFIETGHDDTDAVNVLEEKMGGAAAGAKGTMLEELAIAIQKVCCEFTCKCAAGDGHASAMAILNAVGSYSWDVKVVIALAAFAVTYGELWLVIHQYTTNPLARSIAVLKQTPENSEINGVLKSKFGDFNHLTKLLVEVSKTLIDFRLLPSKYITPEDPPLSNAMNHIASASYWAIRAIVACGAQIVNIGITSGLIGSATEAWDLSSLSHKVQTIHEQLVQRLTICYEFIGEKKNEEAYNNLILLFKTPQKDNVKILKTLIYASNDMHPLVEVSTKKRVHIDILRGKTVLLFISDLDVSEEELMVLKRIYESRKNKNEHQYEIVWIPVVDRTMVTWTREDENKFKSLQCKMPWYTLFHHSLLSPVSIRYIKEVWGFVKKQIVVALDQTGKVVSQNALHTMLIWGNLAYPFTTHKEEELWKKQTWSLDFVLDSIHPEIPKWLAQGDVNICLFGGEDIEWIRKYTNSMKDHAKTSKIKLELIYVGKHNAKEAVKKIMATINSEKLAHTLPDMTNVWYFWTRLESILYSKMHHGKNVSNDEIVKEVMSVMSFDGGDQGWGLIGRGSAQTEIIKGKGDLILHTFSKMKEWEVNVGKLGFLGAFQEHLKSLFGSSSTHHCNRLVLPAIEGAGAPSVVACADCGRPMDKYILYRCCTG*

Click here to download the sequence:
Link to NCBI Protein BLAST