Transcript Information: S_Transcript_97403.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value1E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.531522032335
Replicate 27.8123976138085
Replicate 37.951540311454
Condition 2: 8 Hour
Replicate 112.305799002673
Replicate 28.6920133239593
Replicate 38.80589114173
Condition 3: 24 Hour
Replicate 12.3993560555243
Replicate 211.517674735521
Replicate 37.4839180939771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97403.p1 GENE.S_Transcript_97403~~S_Transcript_97403.p1 ORF type:5prime_partial len:610 (-),score=100.48,SEO_C|PF14577.2|2.5e-87,SEO_N|PF14576.2|3e-55,SEO_N|PF14576.2|2.1e+03 S_Transcript_97403:186-2015(-)
GTGATAGCATTGGCAGCCTTTGCAGTGACTTATGGAGAGCTCTGGCTTGTCATTCACCAATACACCACGAACCCATTGGCTCGATCAATTGCTGTGCTCAAGCAAACACCTGAGAATAGTGAGATTAACGGGGTTCTCAAATCCAAATTTGGTGACTTTAATCATCTTACTAAGCTCTTGGTTGAAGTTTCCAAGACCCTCATTGACTTCAGGCTTTTGCCTTCTAAGTACATTACTCCTGAGGATCCACCCTTGTCTAATGCTATGAACCACATTGCTAGTGCCTCTTATTGGGCTATTCGCGCTATTGTTGCTTGTGGTGCTCAGATTGTTAACATTGGCATCACTTCTGGGTTGATTGGGTCAGCTACAGAGGCTTGGGACCTTTCGAGCTTGTCACATAAAGTCCAGACCATACATGAACAACTTGTGCAACGGCTTACTATTTGCTATGAATTCATAGGGGAGAAAAAAAATGAGGAGGCATACAACAATCTAATACTACTGTTCAAGACACCCCAAAAGGACAATGTGAAGATCCTCAAGACACTAATCTATGCAAGCAATGACATGCATCCTCTTGTGGAAGTCTCTACCAAGAAACGGGTGGGTTCTCCTACACGCCATAACATAATTAGTACAGTAATTAGTCACATTGTCCATCATCATCACAACGAAGTTGATTACGACTATGACCTCAAACAGGTCCATATTGATGTTCTTAGAGGCAAGACTGTGCTGCTATTCATCTCGGACCTTGATGTGTCCGAGGAAGAGCTCATGGTCCTCAAGAGGATCTACGAGTCGAGGAAGAACAAGAATGAGCATCAGTATGAGATCGTTTGGATTCCAGTAGTAGACAGGACTATGGTTACATGGACCAAGGAACATGAAAACAAGTTCAGGAACTTGCAGTACAAGATGCCTTGGTACACTTTGTTCCACCATTCATTGCTTAGCCCTGTTTCTATAAGGTATATCAAGGAGGTGTGGGGATTTGTGAAGAAGCAAATCGTTGTGGCATTGGACCAAACGGGCAAAGTCGTAAGCCAAAATGCTCTTCATATGATGCTCATTTGGGGTAACTTGGCTTATCCTTTCACCACTCACAAGGAAGAGGAGCTTTGGAAGAAACAGACTTGGAGCCTTGACTTTGTTCTTGATTCCATTCATCCCGAAATCCCCAAATGGCTTGCACAAGGGGATGTCAACATATGCTTGTTTGGAGGGGAGGACATAGAATGGATCCGCAAATACACAAACTCCATGAAAGATCACGCCAAGACATCAAACATCAAGCTGGAGTTAATCTATGTAGGAAAACACAACGCCAAGGAGGCAGTCAAGAAGATCATGGCAACCATCAACTCTGAAAAACTGGCTCACACCTTACCTGACATGACCAATGTCTGGTACTTCTGGACCCGCCTAGAGTCGATCCTCTACTCCAAGATGCACCATGGCAAGAATGTGAGCAACGACGAGATAGTCAAGGAAGTCATGTCTGTAATGAGCTTTGATGGGGGTGATCAAGGGTGGGGACTCATCGGAAGGGGATCAGCCCAGACAGAGATCATCAAGGGAAAGGGGGATTTGATCCTGCACACTTTTTCCAAGATGAAGGAATGGGAAGTAAACGTAGGAAAACTCGGGTTTTTGGGTGCTTTTCAGGAGCATCTTAAGTCCCTATTCGGGTCATCCAGCACTCATCATTGCAACCGTCTTGTGTTGCCAGCCATCGAAGGTGCAGGTGCCCCCTCTGTTGTTGCTTGTGCTGATTGTGGCCGTCCTATGGACAAGTACATCCTCTACCGCTGTTGCACTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97403.p1 GENE.S_Transcript_97403~~S_Transcript_97403.p1 ORF type:5prime_partial len:610 (-),score=100.48,SEO_C|PF14577.2|2.5e-87,SEO_N|PF14576.2|3e-55,SEO_N|PF14576.2|2.1e+03 S_Transcript_97403:186-2015(-)
VIALAAFAVTYGELWLVIHQYTTNPLARSIAVLKQTPENSEINGVLKSKFGDFNHLTKLLVEVSKTLIDFRLLPSKYITPEDPPLSNAMNHIASASYWAIRAIVACGAQIVNIGITSGLIGSATEAWDLSSLSHKVQTIHEQLVQRLTICYEFIGEKKNEEAYNNLILLFKTPQKDNVKILKTLIYASNDMHPLVEVSTKKRVGSPTRHNIISTVISHIVHHHHNEVDYDYDLKQVHIDVLRGKTVLLFISDLDVSEEELMVLKRIYESRKNKNEHQYEIVWIPVVDRTMVTWTKEHENKFRNLQYKMPWYTLFHHSLLSPVSIRYIKEVWGFVKKQIVVALDQTGKVVSQNALHMMLIWGNLAYPFTTHKEEELWKKQTWSLDFVLDSIHPEIPKWLAQGDVNICLFGGEDIEWIRKYTNSMKDHAKTSNIKLELIYVGKHNAKEAVKKIMATINSEKLAHTLPDMTNVWYFWTRLESILYSKMHHGKNVSNDEIVKEVMSVMSFDGGDQGWGLIGRGSAQTEIIKGKGDLILHTFSKMKEWEVNVGKLGFLGAFQEHLKSLFGSSSTHHCNRLVLPAIEGAGAPSVVACADCGRPMDKYILYRCCTG*

Click here to download the sequence:
Link to NCBI Protein BLAST