Transcript Information: S_Transcript_97420.p1


Annotated TAIR IDAT4G19020.1
Annotated Gene Namechromomethylase 2
Annotated Gene Symbol(s)CMT2
Annotation TypeOrtholog
Chromosome Positionchr4:10414526-10420936 | Forward length=1295
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.096880092779
Replicate 28.0654065599406
Replicate 36.0243371405158
Condition 2: 8 Hour
Replicate 13.4955533656621
Replicate 24.4585405897568
Replicate 34.449180455285
Condition 3: 24 Hour
Replicate 14.611125170774
Replicate 26.5746434525725
Replicate 36.0080813323508


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97420.p1 GENE.S_Transcript_97420~~S_Transcript_97420.p1 ORF type:complete len:848 (+),score=167.27,DNA_methylase|PF00145.13|1.1e+03,DNA_methylase|PF00145.13|0.2,DNA_methylase|PF00145.13|4.2e-37,Chromo|PF00385.20|1.4e-10,BAH|PF01426.14|4.2e-08 S_Transcript_97420:1672-4215(+)
ATGGAGGAGGTTGTGAAGTCGCCAATGGCGGAGAAATTGGGTGAAGATATGGAAGAAAAGGTGTTGAGAAGGTCGCCGAGAGCATTAGCGTCGATATCGTTAGTGGATGATTATGAGTGTGAGGAAATGAAGGAGTTGTCGTCGAGTCCGAAAAAGAAGAAGAAGAAAACAGCAGCAACTGAGAGGAGAGAGAAAATTGAGGAGGAGAAAGGGATGGTTAGGAAGAAGAGTGAGAATTGTTATTTCGTAGGGGAGGTGGTTCCTGAAGAGGAAGCTCATCAGAGATGGGGATGGCGTTATCAACTACAGAATAGAAGAATTAAGCGCGGAAGTTTTACAACAAATGCTGAGGAAGAAGACGAGCCGATTCTTAAAGTAAAATGCCACTACACTCAGGCACAAATAAATGGGTGCACATTTCATCTGGAAGACTGTGCACTTATAAGGGGTGAAGGAAGAGAAAAACATATTGGAAGGATTATGGAATTCTTTCAAACAGTTGTTGGAGAAGATTATTTCAGGGTTCAGTGGTTCTACAAAGCTGAAGACACGGTAATGAAAGAAAATGCTTCCTTTCATGACAAGAAGCGGATATTTTATTCAACTATAATGAACGACAATTTGTTGGATTGCATTATATCTAAACTCAACGTGGCACAAGTCACGCCTCAGCTAAACTTGAAGTCAAGCTCTATTCCACCATCAGACTTCTATTACAATATGGAGTATTGTTTGGAGTACTCAACATTTCGCGACTTGCCTAGAGATAATTGTGCAAAGAGCTATGAATTATCGTCAGTTAGTTGCCCAGGACCTGATCTCTCTCTTACCAACACTCTTATATTGGAGGACATATCAATCTGTGAACCATGCAATGCTCAGTTAACTATGTTGGATCTTTATGCTGGATGTGGAGCAATGTCAACTGGGTTGTGCATTGGGTCAAGGCTTTCTGGAGTTAATCTTGTGACGAGATGGGCAATTGATTGTGACAGCTTTGCTTGTGAAAGTTTGAGGTTGAATCACCCTGAAACACGAGTTAGGAATGAAGAAGCAGAGGACTTTCTTGAATTATTGAAGCACTGGGAGAAGCTGTGTGACAAATATGTCAATGGAGATGGGAAAGTGACTTTCCCTTCCGTGGTGGATGATTCAGATAAAGCCGAAAGTAGCTCAGATGCTCAATCTGACAATGATGCTACAGCTGATGAATTGGAGGTTTTGAGCTTGATTGATATTTGCTATGGAGATATTGATGCAACAGGAAAGCGTGGGCTGAAATTTAAGGTGCGATGGAAAGGTTATGGTCCAGATGAAGATACATGGGAACCGATTGAGGGGTTGAGTAATTGTCAGGAACTAATACAAAATTTCATCCTCAATGGGTTCAACAGTAAGAGATTGCCTCTTCCTGGTGATGTTGATGTCATATGTGGAGGCCCCCCTTGTCAAGGTATTAGTGGGTATAATCGATTCAGATGTGTTGATTCCCCATTAACTGACGAGAGGAATCGTCAACTAGTAGTCTTTATGGACATAGTGGAATACCTAAAGCCTAAATTTGTTCTTATGGAAAACGTGACTGATATCCTAAGATTTGACAAGGCTTCACTTGGTAGATATGCATTAAGTCGTTTGGTGCATATGAACTATCAGGCGAGAATTGGGATAATGGCTGCAGGTTGTTATGGCCTTCCTCAATTTCGTCTGCGTGTCTTCTTTTGGGGTGCTCTTCCCAGTGAGGAATTGCCCCAGTTTCCGCTTCCCACTCATGATGTTGTTGTTAGACATTGGCCACCACCAGAGTTTGAGCGAAATGTTGTAGCTTATGAAGAAGGCCAACCTCCTGAACTCGAAGATGCTGTTTTTCTCGGAGATGCCATCTCTGACCTTCCTGCGGTGACAAACTATGAATCTTCAGATGAAATGCTCTATACTGGACCTCCAGAAACTGAGTTCCAAAAATATATAAGGTCTACAAAACATGGTTCTGCATCAAGACCAGAGGAAGATGTACTGTATGATCATCGACCGCATCAGTTATTTGAGGATGACTACATACGAGTGTGTCAGATTCCTCATAAAAAGGGAGCAAACTTCAGGGATCTCCCAGGCGTAATTGTGGGAGATGACAATGTGGTTCAGCGAGATCCAACAAAAGCACCCGTGCGTTTGCCCTCTGGAATGCCAATGGTTCCGGAGTATGCATTCACATTCGAGCATGGAAAATCTAAAAGACCGTTTGCACGACTCTGGTGGGATGAGACAATGCCAACTGTGGTCACTTATCCAAATTGCCATAGCCAGGCCGTGCTACATCCGGAGCAAGATCGGGTACTTACAGTACGTGAGTGCGCAAGGCTGCAGGGATTTCCTGATAATTATAGGCTCTGTGGAACTGTCAAGCGAAGGTACCGGCAAGTGGGAAATGCAGTGGCTATGCCTGTCGCTAAGGCCTTGGGTTACTCCTTGGGGATGGCATTCCAAAAGCTTACCGGGGAAGGACCTCTGATAACCCTCCCACCCAATTTTGTGTATTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97420.p1 GENE.S_Transcript_97420~~S_Transcript_97420.p1 ORF type:complete len:848 (+),score=167.27,DNA_methylase|PF00145.13|1.1e+03,DNA_methylase|PF00145.13|0.2,DNA_methylase|PF00145.13|4.2e-37,Chromo|PF00385.20|1.4e-10,BAH|PF01426.14|4.2e-08 S_Transcript_97420:1672-4215(+)
MEEVVKSPMAEKLGEDMEEKVLRRSPRALASISLVDDYECEEMKELSSSPKKKKKKTAATERREKIEEEKGMVRKKSENCYFVGEVVPEEEAHQRWGWRYQLQNRRIKRGSFTTNAEEEDEPILKVKCHYTQAQINGCTFHLEDCALIRGEGREKHIGRIMEFFQTVVGEDYFRVQWFYKAEDTVMKENASFHDKKRIFYSTIMNDNLLDCIISKLNVAQVTPQLNLKSSSIPPSDFYYNMEYCLEYSTFRDLPRDNCAKSYELSSVSCPGPDLSLTNTLILEDISICEPCNAQLTMLDLYAGCGAMSTGLCIGSRLSGVNLVTRWAIDCDSFACESLRLNHPETRVRNEEAEDFLELLKHWEKLCDKYVNGDGKVTFPSVVDDSDKAESSSDAQSDNDATADELEVLSLIDICYGDIDATGKRGLKFKVRWKGYGPDEDTWEPIEGLSNCQELIQNFILNGFNSKRLPLPGDVDVICGGPPCQGISGYNRFRCVDSPLTDERNRQLVVFMDIVEYLKPKFVLMENVTDILRFDKASLGRYALSRLVHMNYQARIGIMAAGCYGLPQFRLRVFFWGALPSEELPQFPLPTHDVVVRHWPPPEFERNVVAYEEGQPPELEDAVFLGDAISDLPAVTNYESSDEMLYTGPPETEFQKYIRSTKHGSASRPEEDVLYDHRPHQLFEDDYIRVCQIPHKKGANFRDLPGVIVGDDNVVQRDPTKAPVRLPSGMPMVPEYAFTFEHGKSKRPFARLWWDETMPTVVTYPNCHSQAVLHPEQDRVLTVRECARLQGFPDNYRLCGTVKRRYRQVGNAVAMPVAKALGYSLGMAFQKLTGEGPLITLPPNFVYS*

Click here to download the sequence:
Link to NCBI Protein BLAST