Transcript Information: S_Transcript_97440.p1


Annotated TAIR IDAT2G47520.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)HRE2
Annotation TypeOrtholog
Chromosome Positionchr2:19502891-19503490 | Reverse length=171
E-Value2.6E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0394734017685
Replicate 22.068386521017
Replicate 31.0703373619947
Condition 2: 8 Hour
Replicate 13.332092237052
Replicate 22.5967324313968
Replicate 34.9483217654421
Condition 3: 24 Hour
Replicate 10.97521801297295
Replicate 21.9223768747795
Replicate 32.0267714254111


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97440.p1 GENE.S_Transcript_97440~~S_Transcript_97440.p1 ORF type:5prime_partial len:224 (+),score=69.29,AP2|PF00847.16|1.3e-10,AP2|PF00847.16|9.7e+03 S_Transcript_97440:3-674(+)
GGGATCCGACAGAGGCCATGGGGCAAATGGGCTGCTGAGATCCGTGACCCGAGAAAGGGTGTTCGGGTTTGGCTCGGTACATTCAATACCCCTGAAGAAGCTGCCAGGGCTTATGATCGTGAAGCTCGTAAAATCAGGGGAAAGAAAGCCAAAGTCAACTTCCCCAACGAAGAACTTGAAGAAAATGTTGTTTACCCTTCACAACACAAAAATCGTGCTGCAAATTCAACTCCCTCGTACCAGCACTTCAACAACTCACCTTACATGCATGAAAGTATGAATTTTTGTACAATGGATTTGAACCAAACCCACCCGTTTTCATCAAATGGGTATGCCTTAAGTGAGGAGAACTCATCTGGGTATGGCTCAGAATGTGTATACAATGGCCCAAATTTGATGGGTCAAGCTAAAGAAGAAGAGGTTAGAGAGAGTTCAGAGGAAGTGAGGAATGCAGAGAAAGAGGTGATAGTGGTGGAAGAACAAGAAGTGGAGAATGAGGTGCAGAAGCTTTCTGAAGAGCTGATGGCTTATGAGAATTACATGAAGTTTTATGAAATTCCATATCTTGATGGACAGTCTAATACTGCTCCAATTTCACAGCCTTGTTGTCAGGATGGGACTGCTACTGTTGATTTATGGAGCTTTGATGATGTTCCTTCTGCTGCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97440.p1 GENE.S_Transcript_97440~~S_Transcript_97440.p1 ORF type:5prime_partial len:224 (+),score=69.29,AP2|PF00847.16|1.3e-10,AP2|PF00847.16|9.7e+03 S_Transcript_97440:3-674(+)
GIRQRPWGKWAAEIRDPRKGVRVWLGTFNTPEEAARAYDREARKIRGKKAKVNFPNEELEENVVYPSQHKNRAANSTPSYQHFNNSPYMHESMNFCTMDLNQTHPFSSNGYALSEENSSGYGSECVYNGPNLMGQAKEEEVRESSEEVRNAEKEVIVVEEQEVENEVQKLSEELMAYENYMKFYEIPYLDGQSNTAPISQPCCQDGTATVDLWSFDDVPSAAA*

Click here to download the sequence:
Link to NCBI Protein BLAST