Transcript Information: S_Transcript_97451.p1


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeOrtholog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7268710246332
Replicate 22.7996041543782
Replicate 33.2976197179041
Condition 2: 8 Hour
Replicate 13.5977947615062
Replicate 24.0001575073195
Replicate 33.3041869034398
Condition 3: 24 Hour
Replicate 12.8664519072013
Replicate 22.4510250443058
Replicate 32.4731060123257


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97451.p1 GENE.S_Transcript_97451~~S_Transcript_97451.p1 ORF type:complete len:1387 (+),score=290.00,DNA_ligase_A_M|PF01068.17|1.8e-46,DNA_ligase_A_N|PF04675.10|4.5e-34,DRMBL|PF07522.10|3.9e-19,DNA_ligase_A_C|PF04679.11|2.4e+03,DNA_ligase_A_C|PF04679.11|3e-18 S_Transcript_97451:489-4649(+)
ATGTCCACCAAAACCCTAACCCTACAAACCTCCGATCTCTATCACCAATCTCAAAACCCCCTCTCTCTATCTCCAATCCCCTCCGATTTCCCTCTCTCCAAACTCATCCCCAAAACCCGCTTTATTATCGACGGTTTTCGAAATTCCGGCGAATTTTCAATTTCCTACTTTCTTTCTCACTTTCACTCCGATCACTACACCGGTCTCACTCCTAACTGGTCTAAAGGCATCGTCTTTTGCTCCGAAACCACTGGTCGCCTTGTTGTCGACATCCTTAGGGTTTCGCCGTTGCTTGTTTTTCGATTGCCGGTGAATCAGACCGTTGTTATCGACGATTGTGAGGTAACCTTAATTGACGCTAATCATTGTCCTGGTGCTGTTCAGTTCTTGTTTAAAGTTCCTGTTGGTGATGGCAAATTTGAGCGCTTTGTTCATACTGGTGATTTTAGGTATTGTAGTGCTATGAAATTAGAACCTGTGTTGAGTCAATTTGTTGGTTGTGATGCTGTTTTTCTTGACACTACTTATTGTCACCCTAAATTCGTGTTCCCATCACAAGAGGAGTCGATTGATTATGTGGTCAGTGTGGTGGATAGGATAGGTGCTGAGAATAGGAATGTAGATAAGAGTGTTTTGTTTCTTGTTGCTACTTATGTCGTTGGAAAAGAGAGGATTTTGCTGGAAATTGCGCGTCGGTGTGGGTGTAAGATATTTGTGGATGGTAGGAAAATGGAGGTTTTGCGGGTGTTAGGGTATGGAGATGAGGAGGGTGTGTTTACTGAAGAGGAATCCGGTAGTAATGTTCATGTTGTTGGGTGGAATGTGTTGGGGGAGACTTGGCTGTATTTTCGGCCTAATTTTTTGAAGATGAAGGATATTATGGTTGAAAAAGGATATTCTAAGGTTGTTGGGATTGTTCCTACTGGTTGGACTTATGAAGTAAAGAGAAACAAGTTTGCGGTTAGAACTAAGGATACACTTGAGATTCATCTTGTGCCTTATAGTGAGCATTCAAATTATGATGAACTCAGAGAGTATGTGAAGTTTTTGAAGCCGAAGCAGGTGATTCCTACCGTGGGTTCTCAAGGAGATAACATAGACAGCAATCATGCTGCAAAGATGCGAAAGCATTTTGCTGGGCTGGTTGACGAAATGGCCAATAAGAAGGAGTTTTTAATGGGTTTTCACCGTGTATCCCAGGGTAAGGGTCAGAGCAAGGTAGATGATCCTGTGATCAAGTTAGATGAGATTGTGGAATCGCCAAAAGAAGAGCCAGGTTTGAGAGGTGTGAATTCTGATAAAGAAGCTGACTCGCATACCATGATAGATGCTTCTGCTTCTTTGGACGAGACTGGTTCACATCATTTGGCCTTGTTGAGTGATAAGGAAAAGGAGGAGATTGTGCAAGAGCTACGTGATTGTCTGCCCATCTGGGTCTCTGATGATCAAGTGCTGGACCTCATCCGAATCTCTGGCAGAAACATTGTTGACTCTGTATCTTATTTTTATGAACATGAAACTGAGTTTCATGAACAGAGCGCAACATCTCTATCTTTATCCCAGTCAAAATCAGAAAGTAGTTGCACCGTAGTTCCAAGGACTGGCTCTGATGAGGGCAGTCTTCCTACAACCGTAAAGTTGGCCGATCAGAAACTCAAATTCTCCCCACTGAAGCCTTCAGTTCGGAGCAGTGTTTCTCCTGGAAAAAGGAGGAGAAATACTGAAAATAAGCATGCTAAGAAGGCCAAAGTTAGTTCAAATCTTCAACCTAGTGGCAAACAATCTACTATAACAAAGTTTTTTAGTAAACATAAAAATGTTTGTCAGGTGAACAATTCTGAAACTGTTTCTGGTAAATGCACTGCTGACAAGAGCTTGTCTGCAGTCCATTCTACTAAACCTTATAAAGAAGAATTGGAGAAATTTATTCAGATCACTAATGGCAGTGAATCAACAAGAAGTTATGCTGCTGAACTCGTAGAAAAGGCCCAAGGAAATATCGAATTTGCACTGGATATGTATTACAATAATTCTGAGGTACCCATTTGTGATGACAGTAGAGTAGATATTTGCAGCAAATCCATACTTGTTGAAAGCGTCGAACCCAGCTGCTCTAACCTAGGGAAAGAAACCTCTTCTGGACCAGGTAAGAGGGTCCATAAATCAAAAGAAGAAGTATTGGCTGAGAATGTAGCTGTTAGCTATATATCATTACCATTGGAAAAGTATTCTCCTATAGATCATGCCTGCTGGAAGCAAGGTCAGCCTGCTCCGTATATACATATGGCACAGACGTTTGACCTCGTTGAAGGTGAAAAGGGCAAACTGAAAGCTACCTCTATGCTTTGCAATATGTTTAGAAGCTTGCTGGCTTTGTCTCCTGAGGACATTCTACCTGCTGTCTATCTCTGCACAAATAAGATTGCCGCTGACCATGAAAATATGGAACTGAACATCGGCGGAAGTTTGGTTGCATCTGCTCTAGAAGAGGCATGTGGGACAAGTAGAGCTAAGATTAGAGAGATGTACAACATTTTTGCTGATCTTGGTGATGTTGCACAAGAATGTCGGCATACACAGTCACTACTAGTTCCTCCATCACCTCTTTTGATTCGAGATGTTTATGCTGTGCTTCGGAAAATTAGCATGCAGACGGGCAGTGGAAGCACAGGTCGGAGGAAAAGCTTAATTGTGCGTCTTATGCGATCTTGCAGAGAGAAGGAGATGAAGTTTCTTGTCAGGACTTTGGTAAGGAACTTACGCATTGGAGCTATGATGAAGACTGTTCTCCCGGCACTTGCTCAAGCTGTTGCATTGAATTTCCTCTCTTCTTGCATTGAAGGAGCAGCTAAAAATCCTAAGGACTTGCTTCAGGGCCTTTCTGCTGCTGTCGTTGAAGCTTATAATGTTCTTCCTGATTTGAATTTGCTGGTTCCTTCACTTATGAGCAAAGGCTTAGCATTTTCAGTAACAACATTGACTATGATACCGGGAATTCCTATCAGGCCCATGCTTGCAAAAATAACTAATGGTGTTGAACAAGCAGTGAAGTTGTTTCAAAATAAGGCTTTCACTTGTGAGTATAAGTATGATGGTCAACGCGCCCAAATTCACAAGCTTGATGATGGATCTGTACGTATATTCTCAAGAAATGGGAACGAGACAACGTCAAGATTTCCAGATATGGTGCATGTTATTCAGGAATTATCTAGACCTTCTTCAGCGTCTTTTGTAGTGGATGCAGAGGTTGTTGGAATTGATCGCAAGAATGGATGCAAGTTTTTATCTTTTCAAGAACTTTCTGCACGGGAGAGAGGAGGCAAGGCTTCATCTGTTACATTGGATAGAATAAAGGTTGACATCTGTGTCATTCTGTTTGATGTCATGTTCATCAATGGAGAGAAGCTGCTGGCTTACTCTCTTCGGAAAAGACGGCAATGTATGAAAGATCTATTTAGGGATGAGAAGCCTGGTTATTTTGAGTATGCGAAGGAGATCACTGTAGAAGCAGATGATGCTTGTCCAGATTGTGAAGCTACTCTAACAAGGATAAAGGCTTTTCTTGAAGATGCATTTCAGTCTTCCTGTGAAGGAATTATGGTTAAATCGCTAGATGTTGATGCTAGCTACTTTGCTTCAAAACGTGCAGACTCATGGCTGAAGGTGAAGAGAGATTATGTGGAAGGGCTGGGGGACTCCCTTGACTTGGTTCCTATTGGTGCTTGGCATGGCAATGGGAGAAAAGCCGGATGGTATAGTCCATTCCTCATGGCTTGTTATAATCCTGATACAGAGGAATTTGAAAGTGTATGCCGTGTAATGTCTGGGTTTTCTGATTCTTTCTACAAGGAGATGAAAGACTTCTTCTCTGAGGACAAGATATTGTCCAAAAAGCCTGTATACTATAGAACAAATGAAACTCCTGCTATTTGGTTTTCAGCCGATTTGGTTTGGGAAATAAGAGGTGCAGACCTCACTCTATCACAAGTTCACAAGGCTGCAGTTGGACTTGTTCATGAGTCACGGGGCATTTCAATGAGGTTTCCGAGATTCATTCGCTCTGTGCCTGATAGAAGACCGGAAGACTGCAGTGCCTCTATAGATATTGCTGAAATGTTTCAATCCCAGACTCGGAAAATGGATGTAAATGTTCCTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97451.p1 GENE.S_Transcript_97451~~S_Transcript_97451.p1 ORF type:complete len:1387 (+),score=290.00,DNA_ligase_A_M|PF01068.17|1.8e-46,DNA_ligase_A_N|PF04675.10|4.5e-34,DRMBL|PF07522.10|3.9e-19,DNA_ligase_A_C|PF04679.11|2.4e+03,DNA_ligase_A_C|PF04679.11|3e-18 S_Transcript_97451:489-4649(+)
MSTKTLTLQTSDLYHQSQNPLSLSPIPSDFPLSKLIPKTRFIIDGFRNSGEFSISYFLSHFHSDHYTGLTPNWSKGIVFCSETTGRLVVDILRVSPLLVFRLPVNQTVVIDDCEVTLIDANHCPGAVQFLFKVPVGDGKFERFVHTGDFRYCSAMKLEPVLSQFVGCDAVFLDTTYCHPKFVFPSQEESIDYVVSVVDRIGAENRNVDKSVLFLVATYVVGKERILLEIARRCGCKIFVDGRKMEVLRVLGYGDEEGVFTEEESGSNVHVVGWNVLGETWLYFRPNFLKMKDIMVEKGYSKVVGIVPTGWTYEVKRNKFAVRTKDTLEIHLVPYSEHSNYDELREYVKFLKPKQVIPTVGSQGDNIDSNHAAKMRKHFAGLVDEMANKKEFLMGFHRVSQGKGQSKVDDPVIKLDEIVESPKEEPGLRGVNSDKEADSHTMIDASASLDETGSHHLALLSDKEKEEIVQELRDCLPIWVSDDQVLDLIRISGRNIVDSVSYFYEHETEFHEQSATSLSLSQSKSESSCTVVPRTGSDEGSLPTTVKLADQKLKFSPLKPSVRSSVSPGKRRRNTENKHAKKAKVSSNLQPSGKQSTITKFFSKHKNVCQVNNSETVSGKCTADKSLSAVHSTKPYKEELEKFIQITNGSESTRSYAAELVEKAQGNIEFALDMYYNNSEVPICDDSRVDICSKSILVESVEPSCSNLGKETSSGPGKRVHKSKEEVLAENVAVSYISLPLEKYSPIDHACWKQGQPAPYIHMAQTFDLVEGEKGKLKATSMLCNMFRSLLALSPEDILPAVYLCTNKIAADHENMELNIGGSLVASALEEACGTSRAKIREMYNIFADLGDVAQECRHTQSLLVPPSPLLIRDVYAVLRKISMQTGSGSTGRRKSLIVRLMRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVALNFLSSCIEGAAKNPKDLLQGLSAAVVEAYNVLPDLNLLVPSLMSKGLAFSVTTLTMIPGIPIRPMLAKITNGVEQAVKLFQNKAFTCEYKYDGQRAQIHKLDDGSVRIFSRNGNETTSRFPDMVHVIQELSRPSSASFVVDAEVVGIDRKNGCKFLSFQELSARERGGKASSVTLDRIKVDICVILFDVMFINGEKLLAYSLRKRRQCMKDLFRDEKPGYFEYAKEITVEADDACPDCEATLTRIKAFLEDAFQSSCEGIMVKSLDVDASYFASKRADSWLKVKRDYVEGLGDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFESVCRVMSGFSDSFYKEMKDFFSEDKILSKKPVYYRTNETPAIWFSADLVWEIRGADLTLSQVHKAAVGLVHESRGISMRFPRFIRSVPDRRPEDCSASIDIAEMFQSQTRKMDVNVPH*

Click here to download the sequence:
Link to NCBI Protein BLAST