Transcript Information: S_Transcript_97452.p2


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeOrtholog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value9.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.719618152141
Replicate 25.7227713528025
Replicate 35.2873373072438
Condition 2: 8 Hour
Replicate 18.515599546432
Replicate 29.3152407305346
Replicate 37.2750333122803
Condition 3: 24 Hour
Replicate 17.4555916350151
Replicate 26.033369634659
Replicate 34.3901852036209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97452.p2 GENE.S_Transcript_97452~~S_Transcript_97452.p2 ORF type:complete len:293 (+),score=62.13,DNA_ligase_A_C|PF04679.11|2.4e-19,DNA_ligase_A_M|PF01068.17|7.3e-07 S_Transcript_97452:3868-4746(+)
ATGTCATGTTCATCAATGGAGAGAAGCTGCTGGCTTACTCTCTTCGGAAAAGACGGCAATGTATGGTTTTGTAAGCCATTGGTGATTAATTTTTCTAATCCATGGGAAAAGTTTTCCTTGATGATGAGGAAGTATTACTTAATTCGATTGTTCATAGGTATGAAAGATCTATTTAGGGATGAGAAGCCTGGTTATTTTGAGTATGCGAAGGAGATCACTGTAGAAGCAGATGATGCTTGTCCAGATTGTGAAGCTACTCTAACAAGGATAAAGGCTTTTCTTGAAGATGCATTTCAGTCTTCCTGTGAAGGAATTATGGTTAAATCGCTAGATGTTGATGCTAGCTACTTTGCTTCAAAACGTGCAGACTCATGGCTGAAGGTGAAGAGAGATTATGTGGAAGGGCTGGGGGACTCCCTTGACTTGGTTCCTATTGGTGCTTGGCATGGCAATGGGAGAAAAGCCGGATGGTATAGTCCATTCCTCATGGCTTGTTATAATCCTGATACAGAGGAATTTGAAAGTGTATGCCGTGTAATGTCTGGGTTTTCTGATTCTTTCTACAAGGAGATGAAAGACTTCTTCTCTGAGGACAAGATATTGTCCAAAAAGCCTGTATACTATAGAACAAATGAAACTCCTGCTATTTGGTTTTCAGCCGATTTGGTTTGGGAAATAAGAGGTGCAGACCTCACTCTATCACAAGTTCACAAGGCTGCAGTTGGACTTGTTCATGAGTCACGGGGCATTTCAATGAGGTTTCCGAGATTCATTCGCTCTGTGCCTGATAGAAGACCGGAAGACTGCAGTGCCTCTATAGATATTGCTGAAATGTTTCAATCCCAGACTCGGAAAATGGATGTAAATGTTCCTCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97452.p2 GENE.S_Transcript_97452~~S_Transcript_97452.p2 ORF type:complete len:293 (+),score=62.13,DNA_ligase_A_C|PF04679.11|2.4e-19,DNA_ligase_A_M|PF01068.17|7.3e-07 S_Transcript_97452:3868-4746(+)
MSCSSMERSCWLTLFGKDGNVWFCKPLVINFSNPWEKFSLMMRKYYLIRLFIGMKDLFRDEKPGYFEYAKEITVEADDACPDCEATLTRIKAFLEDAFQSSCEGIMVKSLDVDASYFASKRADSWLKVKRDYVEGLGDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFESVCRVMSGFSDSFYKEMKDFFSEDKILSKKPVYYRTNETPAIWFSADLVWEIRGADLTLSQVHKAAVGLVHESRGISMRFPRFIRSVPDRRPEDCSASIDIAEMFQSQTRKMDVNVPH*

Click here to download the sequence:
Link to NCBI Protein BLAST