Transcript Information: S_Transcript_97512.p1


Annotated TAIR IDAT3G02300.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:461551-463929 | Forward length=471
E-Value1.7E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5637280271732
Replicate 24.3363150102243
Replicate 32.78831863035
Condition 2: 8 Hour
Replicate 14.0532059350058
Replicate 27.3445377823725
Replicate 36.2612424930399
Condition 3: 24 Hour
Replicate 12.6893269092092
Replicate 23.9649432779355
Replicate 34.5759216631312


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97512.p1 GENE.S_Transcript_97512~~S_Transcript_97512.p1 ORF type:complete len:463 (+),score=110.63,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|92,RCC1|PF00415.14|15,RCC1|PF00415.14|4.6e-08,RCC1|PF00415.14|5.3e-13,RCC1|PF00415.14|2.3e-09,RCC1|PF00415.14|5.9e-05,RCC1_2|PF13540.2|2.6,RCC1_2|PF13540.2|9.7e-07,RCC1_2|PF13540.2|0.0029,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|6.3e-10,RCC1_2|PF13540.2|2.2e-08,RCC1_2|PF13540.2|3.1e-07,RCC1_2|PF13540.2|2.6 S_Transcript_97512:330-1718(+)
ATGGAGATTGGTGAAATACTTGAGGAACCGAGGCCTGTGGCTTTACCAACAAAGAGCGCCATTTATGTGTGGGGTTACAATCAGCGAGGGCAGACCGGGAGGAGAGAGAAGGAGCAGAGGTTGAGGATTCCAAGACAGCTGCCTCCGGAGTTGTTTGGGTGCCCAGCCGGGATCAGTACCCGGTGGTTGGATGTCGCTTGTGGCCGCGAGCACACGGCCGCTGTGGCCTCTGATGGCTCACTCTTCACTTGGGGAGCAAATGACTTCGGTCAGTTGGGTGATGGAACTGAGGAAGGCAGGAAATACCCAAAGAAGGTGGAGCTATTAAAGACTGAATTTGTGAAATCTGTATCTTGTGGAGCAAATTGTACTGTTGCCATTGCAGAACCTCGTGAGAATGATGGGACAATATCAACTGGCAGGCTTTGGGTTTGGGGCCAAAACCAGGGATCGGATTATCCGCGTCTGTTTTGGGGAGCTTTTTCCCCAAACACGGTTATTCGTCAAGTTTCTTGTGGATCTGTCCATGTAATGGCCTTGTCAGAGGACTGCCTTCTCCAATCTTGGGGCTACAATGAATATGGCCAACTTGGCAGAGGTTTTACTTGTGAAGGGCTACAGGGACCCGGTGTTTTAAAAGCATATGCAAAACATCTTGATGAGGCCCCTGAGTTAGTTAAGGTCGCTCAAGTTTCATGTGGCGAGTACCATACTGCTGCTATATCAGATACCGGTGATGTCTACACTTGGGGTCTTGGAAGCATGGGCCAACTGGGACATTGCTCTATTCAATCTGAAGATAAGGAGTTGTTGCCTAGGCGAGTGGTTGCTCTTGATGGAATTTGTGTCACCAGTGTTGCTTGTGGAGGTGTACATACCTGTGCACTCACTGCAAAGGGAGCTCTCTATGCTTGGGGTGGAGGGCAAGTTGGTCAGCTTGGCCTTGGTCCACAAGCTAGTTCTGCATCTTTCATTTTCAAGGACTCTCAAGTGATGCTTCGGACTATCCCAGCTATGGTCATTCCAAGTGGTGTGCAGCTTGTTGCTTGTGGGCATTCTCACACCCTTATCTCTACCTCAGATGGGCGAATCCATGGATGGGGTTATAATAGCTATGGTCAGGCAGCGAATGAGAAGTCTACATATGCTTGGTACCCATCACCAGTTGATTGGTGTGTAGGAGAAGTGAGGAAACTTGCCGCTGGTGGTGGCCATTCAGCTGTGCTGACTGATGCATGTTCTTTGAAGGATTTATGTGAATTCAGGCTTGCTGAAAGTGTTACCCTGGACAATGCCTCCAAGATTGAGGATGTTGCATTCAGAACCAGCTCTGATGCTTTGGTACGCCTTTGTGAAAGATTGAGAGAGTTGCATGATGGTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97512.p1 GENE.S_Transcript_97512~~S_Transcript_97512.p1 ORF type:complete len:463 (+),score=110.63,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|2.8e-15,RCC1|PF00415.14|92,RCC1|PF00415.14|15,RCC1|PF00415.14|4.6e-08,RCC1|PF00415.14|5.3e-13,RCC1|PF00415.14|2.3e-09,RCC1|PF00415.14|5.9e-05,RCC1_2|PF13540.2|2.6,RCC1_2|PF13540.2|9.7e-07,RCC1_2|PF13540.2|0.0029,RCC1_2|PF13540.2|0.00019,RCC1_2|PF13540.2|6.3e-10,RCC1_2|PF13540.2|2.2e-08,RCC1_2|PF13540.2|3.1e-07,RCC1_2|PF13540.2|2.6 S_Transcript_97512:330-1718(+)
MEIGEILEEPRPVALPTKSAIYVWGYNQRGQTGRREKEQRLRIPRQLPPELFGCPAGISTRWLDVACGREHTAAVASDGSLFTWGANDFGQLGDGTEEGRKYPKKVELLKTEFVKSVSCGANCTVAIAEPRENDGTISTGRLWVWGQNQGSDYPRLFWGAFSPNTVIRQVSCGSVHVMALSEDCLLQSWGYNEYGQLGRGFTCEGLQGPGVLKAYAKHLDEAPELVKVAQVSCGEYHTAAISDTGDVYTWGLGSMGQLGHCSIQSEDKELLPRRVVALDGICVTSVACGGVHTCALTAKGALYAWGGGQVGQLGLGPQASSASFIFKDSQVMLRTIPAMVIPSGVQLVACGHSHTLISTSDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKDLCEFRLAESVTLDNASKIEDVAFRTSSDALVRLCERLRELHDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST