Transcript Information: S_Transcript_97516.p1


Annotated TAIR IDAT3G02300.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:461551-463929 | Forward length=471
E-Value2.4E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6092976842301
Replicate 25.5802840098632
Replicate 34.4919076175514
Condition 2: 8 Hour
Replicate 17.6411820105886
Replicate 26.9682807238493
Replicate 37.4380826537289
Condition 3: 24 Hour
Replicate 14.7577849288648
Replicate 24.2992242100331
Replicate 34.0166253385197


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97516.p1 GENE.S_Transcript_97516~~S_Transcript_97516.p1 ORF type:complete len:427 (+),score=97.61,RCC1|PF00415.14|4.4e+03,RCC1|PF00415.14|9.7e-10,RCC1|PF00415.14|84,RCC1|PF00415.14|14,RCC1|PF00415.14|4.1e-08,RCC1|PF00415.14|4.7e-13,RCC1|PF00415.14|2e-09,RCC1|PF00415.14|5.3e-05,RCC1_2|PF13540.2|0.0026,RCC1_2|PF13540.2|0.00017,RCC1_2|PF13540.2|5.7e-10,RCC1_2|PF13540.2|2e-08,RCC1_2|PF13540.2|2.8e-07,RCC1_2|PF13540.2|2.4 S_Transcript_97516:1375-2655(+)
ATGTCGTCATGTGTCAGTTTACTGGTGGATGATAGTTTCTATGTTTTTGTTCAGGGTTTAGGCCTTCAAAGTTGCATTAAAGAATGTTGTTTTTTCCCCCTTATGCTACAATCTTATAATAATAATACCTGGGTAATTTTGGCAGGAGCAAATGACTTCGGTCAGTTGGGTGATGGAACTGAGGAAGGCAGGAAATACCCAAAGAAGGTGGAGCTATTAAAGACTGAATTTGTGAAATCTGTATCTTGTGGAGCAAATTGTACTGTTGCCATTGCAGAACCTCGTGAGAATGATGGGACAATATCAACTGGCAGGCTTTGGGTTTGGGGCCAAAACCAGGGATCGGATTATCCGCGTCTGTTTTGGGGAGCTTTTTCCCCAAACACGGTTATTCGTCAAGTTTCTTGTGGATCTGTCCATGTAATGGCCTTGTCAGAGGACTGCCTTCTCCAATCTTGGGGCTACAATGAATATGGCCAACTTGGCAGAGGTTTTACTTGTGAAGGGCTACAGGGACCCGGTGTTTTAAAAGCATATGCGAAACATCTTGATGAAGCCCCTGAGCTAGTTAAGGTCGCTCAAGTTTCATGTGGCGAGTACCATACTGCTGCTATATCAGATACCGGTGATGTCTACACTTGGGGTCTTGGAAGCATGGGCCAACTGGGACATTGCTCTATTCAATCTGAAGATAAGGAGTTGTTGCCTAGGCGAGTGGTTGCTCTTGATGGAATTTGTGTCACCAGTGTTGCTTGTGGAGGTGTACATACCTGTGCACTCACTGCAAAGGGAGCTCTCTATGCTTGGGGTGGAGGGCAAGTTGGTCAGCTTGGCCTTGGTCCACAAGCTAGTTCTGCATCTTTCATTTTCAAGGACTCTCAAGTGATGCTTCGGACTATCCCAGCTATGGTCATTCCAAGTGGTGTGCAGCTTGTTGCTTGTGGGCATTCTCACACCCTTATCTCTACCTCAGATGGGCGAATCCATGGATGGGGTTATAATAGCTATGGTCAGGCAGCGAATGAGAAGTCTACATATGCTTGGTACCCATCACCAGTTGATTGGTGTGTAGGAGAAGTGAGGAAACTTGCCGCTGGTGGTGGCCATTCAGCTGTGCTGACTGATGCATGTTCTTTGAAGGATTTATGTGAATTCAGGCTTGCTGAAAGTGTTACCCTGGACAATGCCTCCAAGATTGAGGATGTTGCATTCAGAACCAGCTCTGATGCTTTGGTACGCCTTTGTGAAAGATTGAGATGGTTGCATGATGGTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97516.p1 GENE.S_Transcript_97516~~S_Transcript_97516.p1 ORF type:complete len:427 (+),score=97.61,RCC1|PF00415.14|4.4e+03,RCC1|PF00415.14|9.7e-10,RCC1|PF00415.14|84,RCC1|PF00415.14|14,RCC1|PF00415.14|4.1e-08,RCC1|PF00415.14|4.7e-13,RCC1|PF00415.14|2e-09,RCC1|PF00415.14|5.3e-05,RCC1_2|PF13540.2|0.0026,RCC1_2|PF13540.2|0.00017,RCC1_2|PF13540.2|5.7e-10,RCC1_2|PF13540.2|2e-08,RCC1_2|PF13540.2|2.8e-07,RCC1_2|PF13540.2|2.4 S_Transcript_97516:1375-2655(+)
MSSCVSLLVDDSFYVFVQGLGLQSCIKECCFFPLMLQSYNNNTWVILAGANDFGQLGDGTEEGRKYPKKVELLKTEFVKSVSCGANCTVAIAEPRENDGTISTGRLWVWGQNQGSDYPRLFWGAFSPNTVIRQVSCGSVHVMALSEDCLLQSWGYNEYGQLGRGFTCEGLQGPGVLKAYAKHLDEAPELVKVAQVSCGEYHTAAISDTGDVYTWGLGSMGQLGHCSIQSEDKELLPRRVVALDGICVTSVACGGVHTCALTAKGALYAWGGGQVGQLGLGPQASSASFIFKDSQVMLRTIPAMVIPSGVQLVACGHSHTLISTSDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKDLCEFRLAESVTLDNASKIEDVAFRTSSDALVRLCERLRWLHDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST