Transcript Information: S_Transcript_97562.p1


Annotated TAIR IDAT3G13235.1
Annotated Gene Nameubiquitin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4271492-4274348 | Reverse length=414
E-Value5.2E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4849065973945
Replicate 25.9753388384936
Replicate 311.014411827706
Condition 2: 8 Hour
Replicate 114.068833889775
Replicate 212.661844889845
Replicate 311.102003960928
Condition 3: 24 Hour
Replicate 16.1438734817296
Replicate 29.915417564652
Replicate 314.362553064024


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97562.p1 GENE.S_Transcript_97562~~S_Transcript_97562.p1 ORF type:complete len:288 (+),score=87.23,Asp_protease|PF09668.6|5.3e-39,ubiquitin|PF00240.19|2.4e-14,Asp_protease_2|PF13650.2|3.8e-08,Rad60-SLD|PF11976.4|1e-07,gag-asp_proteas|PF13975.2|9.7e-07 S_Transcript_97562:262-1125(+)
ATGAAGATCACTGTAATGACTGCCGATGAACAGATCATCAGCTTAGATGTCGACCCCAATGAATCCGTCGAGAATGTCAAGGCTTTGCTCGAAGTCGAGAGTGGAGTGGCTTTGCAGCAGCAACAGCTCTTGTACAATGGAAAGGAGATGAGGAACCACGAGAAGCTGAGTGGACTTGGTGTTGCTGATGGGGATTTGATTATGATGCTCCCTAATAATGCTTCTGCTCCTGCTCCTTCTAGTCCATCGGCTAATGACGTGCGCCTCAATCCAGATGGGTCTGCTGTCAACCCTGCAGCTTTTCAGCAGCAAATTGGTCGTGATGCTAATCTCATGGCTCAACTCTTTCAGACTGACCCTGAACTTGCGCAAGCAATTTCTGGGGATAATCTCAACAGACTTCAGGAAATTTTGCGGCAGCAGCATCATCAAAGGTCTGAATTGAAACGCAGGGAAGAGGAGGAACTTGCATTGCTTTATGCAGACCCTTTTGATGTGGAAGCCCAGAAGAAAATTGAAGCTGCAATTCGACAGAAAGGCATTGATGAGAACTGGGCTGCAGCCCTGGAGCACAATCCTGAAGCTTTTGCTAGAGTGGTTATGTTGTACGTGGACATGGAAGTGAATGGTGTTCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCAACAATAATTTCTAAAAGTTGTGCGGAGCGCTGTGGACTATTGAGGCTCCTGGATCAACGATATAGAGGCATTGCTCATGGAGTTGGTCAGACAGAAATCCTGGGTCGAATACATGTGGCTCCAATCAAGTCCTCGACTCTCCAAACATGGAGTTCCTCTTTGGTCTGGACATGCTTCGCAAGCATCAGTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97562.p1 GENE.S_Transcript_97562~~S_Transcript_97562.p1 ORF type:complete len:288 (+),score=87.23,Asp_protease|PF09668.6|5.3e-39,ubiquitin|PF00240.19|2.4e-14,Asp_protease_2|PF13650.2|3.8e-08,Rad60-SLD|PF11976.4|1e-07,gag-asp_proteas|PF13975.2|9.7e-07 S_Transcript_97562:262-1125(+)
MKITVMTADEQIISLDVDPNESVENVKALLEVESGVALQQQQLLYNGKEMRNHEKLSGLGVADGDLIMMLPNNASAPAPSSPSANDVRLNPDGSAVNPAAFQQQIGRDANLMAQLFQTDPELAQAISGDNLNRLQEILRQQHHQRSELKRREEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQTEILGRIHVAPIKSSTLQTWSSSLVWTCFASISA*

Click here to download the sequence:
Link to NCBI Protein BLAST