Transcript Information: S_Transcript_97565.p1


Annotated TAIR IDAT3G13235.1
Annotated Gene Nameubiquitin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4271492-4274348 | Reverse length=414
E-Value1.1E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.740045750494
Replicate 215.316773702836
Replicate 38.6435880893065
Condition 2: 8 Hour
Replicate 114.751397813355
Replicate 217.886264952563
Replicate 315.759837201678
Condition 3: 24 Hour
Replicate 113.687270357515
Replicate 27.8386115226465
Replicate 312.01049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97565.p1 GENE.S_Transcript_97565~~S_Transcript_97565.p1 ORF type:complete len:399 (+),score=115.97,Asp_protease|PF09668.6|7.8e-56,ubiquitin|PF00240.19|4.1e-14,Asp_protease_2|PF13650.2|4.3e-11,Rad60-SLD|PF11976.4|1.8e-07,RVP_2|PF08284.7|9.5e-07,gag-asp_proteas|PF13975.2|1.5e-06 S_Transcript_97565:262-1458(+)
ATGAAGATCACTGTAATGACTGCCGATGAACAGATCATCAGCTTAGATGTCGACCCCAATGAATCCGTCGAGAATGTCAAGGCTTTGCTCGAAGTCGAGAGTGGAGTGGCTTTGCAGCAGCAACAGCTCTTGTACAATGGAAAGGAGATGAGGAACCACGAGAAGCTGAGTGGACTTGGTGTTGCTGATGGGGATTTGATTATGATGCTCCCTAATAATGCTTCTGCTCCTGCTCCTTCTAGTCCATCGGCTAATGACGTGCGCCTCAATCCAGATGGGTCTGCTGTCAACCCTGCAGCTTTTCAGCAGCAAATTGGTCGTGATGCTAATCTCATGGCTCAACTCTTTCAGACTGACCCTGAACTTGCGCAAGCAATTTCTGGGGATAATCTCAACAGACTTCAGGAAATTTTGCGGCAGCAGCATCATCAAAGGTCTGAATTGAAACGCAGGGAAGAGGAGGAACTTGCATTGCTTTATGCAGACCCTTTTGATGTGGAAGCCCAGAAGAAAATTGAAGCTGCAATTCGACAGAAAGGCATTGATGAGAACTGGGCTGCAGCCCTGGAGCACAATCCTGAAGCTTTTGCTAGAGTGGTTATGTTGTACGTGGACATGGAAGTGAATGGTGTTCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCAACAATAATTTCTAAAAGTTGTGCGGAGCGCTGTGGACTATTGAGGCTCCTGGATCAACGATATAGAGGCATTGCTCATGGAGTTGGTCAGACAGAAATCCTGGGTCGAATACATGTGGCTCCAATCAAGATTGGGAATGTGTTTTACCCTTGTTCCTTTACAGTCCTCGACTCTCCAAACATGGAGTTCCTCTTTGGTCTGGACATGCTTCGCAAGCATCAGTGCATAATTGATTTGAAGGACAATGTATTAAGAGTTGGTGGAGGAGAGGTTTCTGTACCATTTTTGGCTGAAAAGGACATCCCTTCTCAGTTTCGGGATGAAGAGAGGTATTCAAAGCAGGCTTCCAGTTCAGGAGCTCCTGATATGTCTCAAACAAAAGAGAATAAAGACGGCCCGTTTGGAAGTCAATCTTCTGGTGCTGCTCGTGCTCTTCCTGGTCAGGTAATAATTGTTTACACGTCAAATTTATCTTCCACTCATCTTTTGCACTTCCGTCCCGAAATGAACTTCGAACTCCATTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97565.p1 GENE.S_Transcript_97565~~S_Transcript_97565.p1 ORF type:complete len:399 (+),score=115.97,Asp_protease|PF09668.6|7.8e-56,ubiquitin|PF00240.19|4.1e-14,Asp_protease_2|PF13650.2|4.3e-11,Rad60-SLD|PF11976.4|1.8e-07,RVP_2|PF08284.7|9.5e-07,gag-asp_proteas|PF13975.2|1.5e-06 S_Transcript_97565:262-1458(+)
MKITVMTADEQIISLDVDPNESVENVKALLEVESGVALQQQQLLYNGKEMRNHEKLSGLGVADGDLIMMLPNNASAPAPSSPSANDVRLNPDGSAVNPAAFQQQIGRDANLMAQLFQTDPELAQAISGDNLNRLQEILRQQHHQRSELKRREEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQTEILGRIHVAPIKIGNVFYPCSFTVLDSPNMEFLFGLDMLRKHQCIIDLKDNVLRVGGGEVSVPFLAEKDIPSQFRDEERYSKQASSSGAPDMSQTKENKDGPFGSQSSGAARALPGQVIIVYTSNLSSTHLLHFRPEMNFELHL*

Click here to download the sequence:
Link to NCBI Protein BLAST