Transcript Information: S_Transcript_97567.p1


Annotated TAIR IDAT3G13235.1
Annotated Gene Nameubiquitin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4271492-4274348 | Reverse length=414
E-Value2.1E-223
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.624701782608
Replicate 247.758193376315
Replicate 346.039856906034
Condition 2: 8 Hour
Replicate 149.621549866259
Replicate 240.78935115185
Replicate 339.844635232556
Condition 3: 24 Hour
Replicate 142.949262456084
Replicate 238.30348784574
Replicate 333.283327362684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97567.p1 GENE.S_Transcript_97567~~S_Transcript_97567.p1 ORF type:complete len:413 (+),score=138.32,Asp_protease|PF09668.6|8.4e-56,ubiquitin|PF00240.19|4.4e-14,Asp_protease_2|PF13650.2|4.6e-11,UBA|PF00627.27|8.5e-10,Rad60-SLD|PF11976.4|1.9e-07,RVP_2|PF08284.7|1e-06,gag-asp_proteas|PF13975.2|1.6e-06 S_Transcript_97567:262-1500(+)
ATGAAGATCACTGTAATGACTGCCGATGAACAGATCATCAGCTTAGATGTCGACCCCAATGAATCCGTCGAGAATGTCAAGGCTTTGCTCGAAGTCGAGAGTGGAGTGGCTTTGCAGCAGCAACAGCTCTTGTACAATGGAAAGGAGATGAGGAACCACGAGAAGCTGAGTGGACTTGGTGTTGCTGATGGGGATTTGATTATGATGCTCCCTAATAATGCTTCTGCTCCTGCTCCTAGTCCATCGGCTAATGACGTGCGCCTCAATCCAGATGGGTCTGCTGTCAACCCTGCAGCTTTTCAGCAGCAAATTGGTCGTGATGCTAATCTCATGGCTCAACTCTTTCAGACTGACCCTGAACTTGCGCAAGCAATTTCTGGGGATAATCTCAACAGACTTCAGGAAATTTTGCGGCAGCAGCATCATCAAAGGTCTGAATTGAAACGCAGGGAAGAGGAGGAACTTGCATTGCTTTATGCAGACCCTTTTGATGTGGAAGCCCAGAAGAAAATTGAAGCTGCAATTCGACAGAAAGGCATTGATGAGAACTGGGCTGCAGCCCTGGAGCACAATCCTGAAGCTTTTGCTAGAGTGGTTATGTTGTACGTGGACATGGAAGTGAATGGTGTTCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCAACAATAATTTCTAAAAGTTGTGCGGAGCGCTGTGGACTATTGAGGCTCCTGGATCAACGATATAGAGGCATTGCTCATGGAGTTGGTCAGACAGAAATCCTGGGTCGAATACATGTGGCTCCAATCAAGATTGGGAATGTGTTTTACCCTTGTTCCTTTACAGTCCTCGACTCTCCAAACATGGAGTTCCTCTTTGGTCTGGACATGCTTCGCAAGCATCAGTGCATAATTGATTTGAAGGACAATGTATTAAGAGTTGGTGGAGGAGAGGTTTCTGTACCATTTTTGGCTGAAAAGGACATCCCTTCTCAGTTTCGGGATGAAGAGAGGTATTCAAAGCAGGCTTCCAGTTCAGGAGCTCCTGATATGTCTCAAACAAAAGAGAATAAAGACGGCCCGTTTGGAAGTCAATCTTCTGGTGCTGCTCGTGCTCTTCCTGGTCAGGGTCCTGAATTTGAAGCCAAAATTGCCAAGCTTGTTGAGCTAGGATTTGAAAGGAATGCTGTCATAGAAGCTCTCAGGCTTTTTGATGGCAATGAAGAGCAGGCAGCTGGGTTTCTCTTTGGAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97567.p1 GENE.S_Transcript_97567~~S_Transcript_97567.p1 ORF type:complete len:413 (+),score=138.32,Asp_protease|PF09668.6|8.4e-56,ubiquitin|PF00240.19|4.4e-14,Asp_protease_2|PF13650.2|4.6e-11,UBA|PF00627.27|8.5e-10,Rad60-SLD|PF11976.4|1.9e-07,RVP_2|PF08284.7|1e-06,gag-asp_proteas|PF13975.2|1.6e-06 S_Transcript_97567:262-1500(+)
MKITVMTADEQIISLDVDPNESVENVKALLEVESGVALQQQQLLYNGKEMRNHEKLSGLGVADGDLIMMLPNNASAPAPSPSANDVRLNPDGSAVNPAAFQQQIGRDANLMAQLFQTDPELAQAISGDNLNRLQEILRQQHHQRSELKRREEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQTEILGRIHVAPIKIGNVFYPCSFTVLDSPNMEFLFGLDMLRKHQCIIDLKDNVLRVGGGEVSVPFLAEKDIPSQFRDEERYSKQASSSGAPDMSQTKENKDGPFGSQSSGAARALPGQGPEFEAKIAKLVELGFERNAVIEALRLFDGNEEQAAGFLFGG*

Click here to download the sequence:
Link to NCBI Protein BLAST