Transcript Information: S_Transcript_9784.p1


Annotated TAIR IDAT4G00830.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:352782-354965 | Forward length=495
E-Value2.3E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.873105197516
Replicate 233.806583607699
Replicate 333.745515143183
Condition 2: 8 Hour
Replicate 135.890089379128
Replicate 234.936859519573
Replicate 331.035206689053
Condition 3: 24 Hour
Replicate 134.797916167013
Replicate 232.642984971021
Replicate 332.033477140744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9784.p1 GENE.S_Transcript_9784~~S_Transcript_9784.p1 ORF type:complete len:511 (+),score=167.20,RRM_1|PF00076.18|5.4e-24,RRM_1|PF00076.18|8.7e-10,RRM_1|PF00076.18|7.1e-13,RRM_6|PF14259.2|2.4e-13,RRM_6|PF14259.2|5.2e-05,RRM_6|PF14259.2|5.5e-12,RRM_5|PF13893.2|4.1e-07,RRM_5|PF13893.2|2.9,RRM_5|PF13893.2|0.00048,RRM_occluded|PF16842.1|0.002,RRM_occluded|PF16842.1|0.004,RRM_7|PF16367.1|0.0024,RRM_7|PF16367.1|2.2e+02,RRM_7|PF16367.1|2.6e+02 S_Transcript_9784:748-2280(+)
ATGAAAAAAGTTCTCATGGCTTATATACATCTCTGGGCTCCCCATAAAAGCTCTCAGTTGATTGAGGATCTGATTATTCACAGAAGCATATCAGAAGATTTACATACAGCACCCATGGCAGATGGTTCAGAGATTGATGAGCGTGTGGATCTTGATGATGATAATTACATGGAAGAGACGGACGAAGATGTTGTTGAAGGCACCGAGGATGAGGTAGAGGAGGGAACTGGTGATGAGAAGGCTGAGGAACAGTATGAGGAGTTGAGGACTGATGGTAGTGGGAAAGAGCAATTGCCTGATGGTGATCAAAGCCCCATTGCTGGTGAACATGGAGAAGATGAAGAAAAGCATACAGCTTCTATGAATGAAGATGATAAAGAGAAGCATGCTGAACTTCTCTCTCTTCCTCCCTATGGGTCTGAGGTTTTCATTGGTGGACTTCCAAAGGATGCTTCAGAAGAAGATCTAAGAGATCTTTGTGAGAATATCGGTGAAATATTTGAGGTAAGGCTAATGAAAAATAAAGATACTGGTGAAAGCAAGGGATATGCATTTGTGGCATTTAAAACAAAGGAGGATGCCCAGAAGGCCATAGAAGAGCTCAAGAACAAAGAATTTAAGGGAAAGACGTTGAGATGCTCATTGTCTGATTCCAAGCATAGATTGTTCATAGGTAATATACCTAAAAGCTGGTCCGAGGATCAGTTCAAGCAAGTAATACATGATGTTGGCCCTGGTGCAGAGATGATTGACCTCAAGCAGGATGCTTTAAATCCTGGCCGCAACCGTGGCTTTGCTTTTATTGAGTATTACAACAATGCTTGTGCTGATTATGCTAGACAGAAAATGTCTAGTGCAAGTTTTAAGCTGGAGGGAAACACGCCTACTGTCACCTGGGCTGATCCAAAGAGTGCACCTGACTCTGCTGCAGCTTCCCAGGTTAAGGCACTCTATGTGAAGAATATACCTGACAGTGCCACTCCTGAGCAATTGAAGGAACTCTTTCAGCGCCATGGAGAAGTCACAAAGGTTGTGTTGCCTCCTGGTAAAGGTGGACAAGGCAAAGGAAATTTTGGGTTTATTCATTTTGCTGAAAGGTCGAGTGCTCTTAAGGCTGTCAAAGACTCGGAAAAGTATGAGATTGATGGTCAGGCATTAGATGTTACTATGGCTAAGCCTCAGACAGATAAGAAGTCTGAAGCAGCTGCTTCCTTCAATGCTGCGACAAGCTTTCTTGCTCAACCAGCATATGGTTTCGGTGGGAATCCATATAATGCACTGGGGGCGAGCTATGGTGTTGCTGGTGGATACCAACAGCCAATGATATATGGGAGGGGTCCAATGCCTTCTGGCATGCAGATGGTGCCAATGGTTTTGCCTGACGGCCGAATTGGCTATGTCTTGCAGCAGCCTGGTGTTCAGATGCCACCAGTACGGCCAAGGAGAAATGACAGGTCCAATGCATCGGGTGGTTCCCAGGGAAGAGGAAGCGGGGATGACGGTAACAGGAGTAGAAGATACCGACCCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9784.p1 GENE.S_Transcript_9784~~S_Transcript_9784.p1 ORF type:complete len:511 (+),score=167.20,RRM_1|PF00076.18|5.4e-24,RRM_1|PF00076.18|8.7e-10,RRM_1|PF00076.18|7.1e-13,RRM_6|PF14259.2|2.4e-13,RRM_6|PF14259.2|5.2e-05,RRM_6|PF14259.2|5.5e-12,RRM_5|PF13893.2|4.1e-07,RRM_5|PF13893.2|2.9,RRM_5|PF13893.2|0.00048,RRM_occluded|PF16842.1|0.002,RRM_occluded|PF16842.1|0.004,RRM_7|PF16367.1|0.0024,RRM_7|PF16367.1|2.2e+02,RRM_7|PF16367.1|2.6e+02 S_Transcript_9784:748-2280(+)
MKKVLMAYIHLWAPHKSSQLIEDLIIHRSISEDLHTAPMADGSEIDERVDLDDDNYMEETDEDVVEGTEDEVEEGTGDEKAEEQYEELRTDGSGKEQLPDGDQSPIAGEHGEDEEKHTASMNEDDKEKHAELLSLPPYGSEVFIGGLPKDASEEDLRDLCENIGEIFEVRLMKNKDTGESKGYAFVAFKTKEDAQKAIEELKNKEFKGKTLRCSLSDSKHRLFIGNIPKSWSEDQFKQVIHDVGPGAEMIDLKQDALNPGRNRGFAFIEYYNNACADYARQKMSSASFKLEGNTPTVTWADPKSAPDSAAASQVKALYVKNIPDSATPEQLKELFQRHGEVTKVVLPPGKGGQGKGNFGFIHFAERSSALKAVKDSEKYEIDGQALDVTMAKPQTDKKSEAAASFNAATSFLAQPAYGFGGNPYNALGASYGVAGGYQQPMIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPVRPRRNDRSNASGGSQGRGSGDDGNRSRRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST