Transcript Information: S_Transcript_97868.p1


Annotated TAIR IDAT1G25500.2
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8955437-8957793 | Reverse length=488
E-Value9.8E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5577351977084
Replicate 24.6517929789941
Replicate 34.184797545074
Condition 2: 8 Hour
Replicate 17.4510399903236
Replicate 28.6252910418223
Replicate 38.8173988084863
Condition 3: 24 Hour
Replicate 16.4043232723429
Replicate 25.2791207687877
Replicate 34.4062607695685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_97868.p1 GENE.S_Transcript_97868~~S_Transcript_97868.p1 ORF type:complete len:498 (+),score=63.33,Choline_transpo|PF04515.8|2.3e+03,Choline_transpo|PF04515.8|3.3e-52 S_Transcript_97868:120-1613(+)
ATGAACGACTCTCAAAGTCCTTCTTCTTCTTCCTCCTATAATTCTGTCTCCATTTCCCCCAACGGCCAGGAGGTCGCTCATAATCAAAGAAGCATCAATGGCACGTATGCTTTGTCATTTGAGCAGTCAAGACATTGGCGAGATGTGTTCTGGTTAGCAGTTTTCATTGTGCATTTGGGAGGGCTAGGCCTTCTTCTAGCAGTCCTTGGACTTAATAGATTTAAGAAGAATGATAGACTAGATATTGATAAATACACGGATGGGTTTCTGGAGAACCACCATGGTCTCACGGAGGACTATTGGCCTTTGTATGCAGTTGCTGGCGGGGTTGGTACATTCCTTGGATGGACTTGGTTATTATTGCTTGGTTGTCAGGCCAATCACATGATGAAAGTTTCAGTGCACATATTAACTACCTATCTTGCACTGGTTGGTATCTTTTGTTTTTGGACCAAGCAGTTTTTCTGGGGCATCGCTTTCGCAATTGGAGCAGTTTTGCAGTTTTTGTATGTCATCTCAGTTATAGACAGACTTCCATTTACGATGATGGTGCTGCAGAAAGCTGCAAAGATGGTGTGGAGGCTTCCTAAAGTTATGAGCGTAGCATTTGCCTTTATTCTGGTCATGCTTTCATGGATGGTTCTATGGTCCTTTGGAGCTTCTGGTGTTGTGGCTTCAAGCATAGGTGATAGCGGAAGATGGTGGCTTCTTGTGGTACTTTCTGTTAGTTTATTTTGGACAGGTGCAGTCCTTTGTAATACAGTTCACGTCATAGTTTCGGGAATGGTTTTTCTTGTTCTTATTCATGGTGGTCAAGAAACACCATCTATGCCTCCAAACTCATTGATGAAATCTTTGCGTTATGCTGTAACAACATCCTTTGGAAGCATCTGCTACGGGTCACTATTTACAGCTGCTATCCGCACCCTCAGATGGGAGATAAGAGGATTTCGTTCGAAGATTGGCAATAATGAGTGCTTACTTTGCTGTGTTGACTTCCTATTCCATCTTGTGGAAACACTTGTTCGGTTCTTCAACAAATATGCATATGTGCAGATTGCAGTCTCCGGTAAAAGCTTTAATCATTCAGCAAGAGATGCCTGGGAACTGTTCCAGTCAACTGGCGTTGAAGCTCTAGTTGCATACGATTGTTCTGGTGCTGTCCTTTTGATGGGAACTGTCTTGGGAGGGCTAATTACTGGGACTTGTGCAGGAGTTTGGACATGGTTTCGATCAAATGACAAAGTCTTAATGGTCGGCTCCACCTCAATCCTGATGGGGATGATTTTGGTTGGGCTGGCAATGGTGGTGGTGGAAGGTGCTGTTACAGTCATGTACATATGTTATGCTCTTGATCCCCTATTCATTCATAGATGGGATGTTGATTTCTTCAACCAAATGTCAGAAATGCTTCATCAGCGCCTGCAACATAGGAGCGCACGAGGTCGACAAGTTTTGACCCAGAACACACTGGACTTACGCATACAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_97868.p1 GENE.S_Transcript_97868~~S_Transcript_97868.p1 ORF type:complete len:498 (+),score=63.33,Choline_transpo|PF04515.8|2.3e+03,Choline_transpo|PF04515.8|3.3e-52 S_Transcript_97868:120-1613(+)
MNDSQSPSSSSSYNSVSISPNGQEVAHNQRSINGTYALSFEQSRHWRDVFWLAVFIVHLGGLGLLLAVLGLNRFKKNDRLDIDKYTDGFLENHHGLTEDYWPLYAVAGGVGTFLGWTWLLLLGCQANHMMKVSVHILTTYLALVGIFCFWTKQFFWGIAFAIGAVLQFLYVISVIDRLPFTMMVLQKAAKMVWRLPKVMSVAFAFILVMLSWMVLWSFGASGVVASSIGDSGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGQETPSMPPNSLMKSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVSGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVLGGLITGTCAGVWTWFRSNDKVLMVGSTSILMGMILVGLAMVVVEGAVTVMYICYALDPLFIHRWDVDFFNQMSEMLHQRLQHRSARGRQVLTQNTLDLRIQS*

Click here to download the sequence:
Link to NCBI Protein BLAST