Transcript Information: S_Transcript_9787.p1


Annotated TAIR IDAT4G00830.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:352782-354965 | Forward length=495
E-Value7E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.162973220766
Replicate 29.5231962738492
Replicate 310.446080984852
Condition 2: 8 Hour
Replicate 110.537741699677
Replicate 212.802639944218
Replicate 39.3256833271793
Condition 3: 24 Hour
Replicate 18.8318181299863
Replicate 28.2333377992199
Replicate 39.3104812354823


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_9787.p1 GENE.S_Transcript_9787~~S_Transcript_9787.p1 ORF type:complete len:512 (+),score=160.45,RRM_1|PF00076.18|6.5e-23,RRM_1|PF00076.18|2.4e-08,RRM_1|PF00076.18|7.1e-13,RRM_6|PF14259.2|4.3e-14,RRM_6|PF14259.2|1.2e-05,RRM_6|PF14259.2|5.6e-12,RRM_5|PF13893.2|6.7e-06,RRM_5|PF13893.2|16,RRM_5|PF13893.2|0.00048,RRM_occluded|PF16842.1|0.0015,RRM_occluded|PF16842.1|0.0039,RRM_7|PF16367.1|0.0022,RRM_7|PF16367.1|1.3e+02,RRM_7|PF16367.1|2.6e+02 S_Transcript_9787:748-2283(+)
ATGAAAAAAGTTCTCATGGCTTATATACATCTCTGGGCTCCCCATAAAAGCTCTCAGTTGATTGAGGATCTGATTATTCACAGAAGCATATCAGAAGATTTACATACAGCACCCATGGCAGATGGTTCAGAGATTGATGAGCGTGTGGATCTTGATGATGATAATTACATGGAAGAGACGGATGAAGATGTTGCTGACGGTGTTGATGAAGATGAGCCAGAGGAGGGAACTGGTGATGACAAGGCTGAGGAACAGTATCAAGAGTTGATAGCTGATGGTAGTGGGAAGGAGCAATCATCGGATGCTGATCAAAGCCCCATTGGTGATGAAAATGGAGGTGATGAAGAAAAACAAACAGCTTTGATTAGTGAAGATGATAAGGAGAAGCATGCTGAGCTTCTCTCTCTTCCGCCCTTTGGATCCGAGGTTTTCATTGGTGGACTTCCAAAGGATGTTTTGGAAGATGATTTAAGAGATCTGTGTGAGCCTATAGGTGAAATTCATGAGGTTAGGCTGATGAAAAATAAGGATACTGGTGAAAGCAAGGGGTATGCGTTTGTGGCTTTTAAAACAAAGGAGGATGCCCAGAAGGCCATAGAAGATTTGAAAAGCAAAGAATATAGGGGAAAGACTTTGAGATGCTCATTTTCTGATTCAAAGCATAGGCTGTTTATTGGTAATATACCTAAAAGTTGGTCAGATGATCAGTTTAAAAAAGTAATTCATGATGTTGGTCCTGGTGTAGTGATGATCGACCTCAAGCAGGATGCTTTAAATCCTGGCCGCAACCGTGGCTTTGCTTTTATTGAGTATTACAACAATGCTTGTGCTGATTATTCCAGACAGAAAATGTCTGGTGGAAGTTTTAAGCTAGAAGGAAACACCCCCACTGTTACCTGGGCAGATCCAAAGACTGCACCTGACTCTGTTGCAGCATCTCAGGTAAAGGCACTTTATGTGAAAAATATACCTGACAGTGCCACCCCTGAGCAATTGAAGGAGCTCTTTCAGCGCCATGGAGAAGTCACAAAGGTTGTGTTGCCTCCTGGTAAAGGTGGACAAGGCAAAGGAAATTTTGGGTTTATTCATTTTGCTGAAAGGTCGAGTGCTCTTAAGGCTGTCAAAGACTCGGAAAAGTATGAGATTGATGGTCAGGCATTAGATGTTACTATGGCTAAGCCTCAGACAGATAAGAAGTCTGAAGCAGCTGCTTCCTTCAATGCTGCGACAAGCTTTCTTGCTCAACCAGCATATGGTTTCGGTGGGAATCCATATAATGCACTGGGGGCGAGCTATGGTGTTGCTGGTGGATACCAACAGCCAATGATATATGGGAGGGGTCCAATGCCTTCTGGCATGCAGATGGTGCCAATGGTTTTGCCTGACGGCCGAATTGGCTATGTCTTGCAGCAGCCTGGTGTTCAGATGCCACCAGTACGGCCAAGGAGAAATGACAGGTCCAATGCATCGGGTGGTTCCCAGGGAAGAGGAAGCGGGGATGACGGTAACAGGAGTAGAAGATACCGACCCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_9787.p1 GENE.S_Transcript_9787~~S_Transcript_9787.p1 ORF type:complete len:512 (+),score=160.45,RRM_1|PF00076.18|6.5e-23,RRM_1|PF00076.18|2.4e-08,RRM_1|PF00076.18|7.1e-13,RRM_6|PF14259.2|4.3e-14,RRM_6|PF14259.2|1.2e-05,RRM_6|PF14259.2|5.6e-12,RRM_5|PF13893.2|6.7e-06,RRM_5|PF13893.2|16,RRM_5|PF13893.2|0.00048,RRM_occluded|PF16842.1|0.0015,RRM_occluded|PF16842.1|0.0039,RRM_7|PF16367.1|0.0022,RRM_7|PF16367.1|1.3e+02,RRM_7|PF16367.1|2.6e+02 S_Transcript_9787:748-2283(+)
MKKVLMAYIHLWAPHKSSQLIEDLIIHRSISEDLHTAPMADGSEIDERVDLDDDNYMEETDEDVADGVDEDEPEEGTGDDKAEEQYQELIADGSGKEQSSDADQSPIGDENGGDEEKQTALISEDDKEKHAELLSLPPFGSEVFIGGLPKDVLEDDLRDLCEPIGEIHEVRLMKNKDTGESKGYAFVAFKTKEDAQKAIEDLKSKEYRGKTLRCSFSDSKHRLFIGNIPKSWSDDQFKKVIHDVGPGVVMIDLKQDALNPGRNRGFAFIEYYNNACADYSRQKMSGGSFKLEGNTPTVTWADPKTAPDSVAASQVKALYVKNIPDSATPEQLKELFQRHGEVTKVVLPPGKGGQGKGNFGFIHFAERSSALKAVKDSEKYEIDGQALDVTMAKPQTDKKSEAAASFNAATSFLAQPAYGFGGNPYNALGASYGVAGGYQQPMIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPVRPRRNDRSNASGGSQGRGSGDDGNRSRRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST