Transcript Information: S_Transcript_98159.p1


Annotated TAIR IDAT5G65820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26339876-26341789 | Reverse length=637
E-Value3.8E-303
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.782855508706
Replicate 210.374563639259
Replicate 310.108308784752
Condition 2: 8 Hour
Replicate 19.9627014305995
Replicate 210.861447125852
Replicate 311.325061017608
Condition 3: 24 Hour
Replicate 110.839064327394
Replicate 212.940863403899
Replicate 311.089998150646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98159.p1 GENE.S_Transcript_98159~~S_Transcript_98159.p1 ORF type:complete len:655 (+),score=130.94,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|8.4e-08,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|4.5e-18,PPR_2|PF13041.2|9.2e-12,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.00016,PPR|PF01535.16|0.033,PPR|PF01535.16|0.0036,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|0.0035,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|55,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0032,PPR|PF01535.16|2.6,PPR|PF01535.16|0.08,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|4.6e-10,PPR_1|PF12854.3|0.00035,PPR_1|PF12854.3|5.3e-08,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0097,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1e+02,MRP-S27|PF10037.5|2.8e-05,MRP-S27|PF10037.5|9.4e+02,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|58 S_Transcript_98159:202-2166(+)
ATGCGTAGGCTGTCCTTAAAATTATTCTCTCTCTACAATAATTGTCACCCTTCTTTGGTGACCACAGAATCCCTTGCTCAAACAATCCTCACTGCCAATTTTTCAAACCTATCAGCCACTCATAACATTAAACCTTCTAATCGCTCTCCCGACATAAACCCTAATTCTAATGTTGATCGGAAAAGTGGGTTTGGATTTGTACAATTAGATAGTAACCCTCAAAACATGACCCATGATCGTAACTTTGATGAATTTGAGGTGGATGTTGAGAAAATCTATCGAATTTTAAGGAAGTTCCACTCTAGGGTTCCAAAATTGGAACTTGCTTTACAAGAATCTGGGATGGTTATGAGGTCTGGTTTGACCGAACGCGTGTTGAATCGATGTGGGGATGCTGGGAATTTGGCTTATAGGTTTTTTATATGGGCATCTAAGCAACCTGGTTATAGGCATAGCTTTGATGTGTATAAGGCTATGATAAGGGCTTTAGGGAAAATGAGACAATTTGGGGCGGTTTGGGCCATAATAGAGGAAATGCGGAGAGAGAATCCGCTATTGATTACTCCTGATGTGTTTGTGGTGCTGATGAGGAGGTTTGCATCAGCTAGGATGGTGAAGAAGGCGGTCGAGGTTTTAGATGAAATGCCTAAATATGGGTGTGAACCTGATGATTATGTGTTTGGGTGTTTGTTGGATGCATTGTGTAAGAATGGTAATGTAAAGGAAGCAGCCTCGCTGTTTGAGGATATGAGAACGAGATTTCCACCTACCATAAAGCATTTTACTTCGTTGTTGTATGGATGGTGCAAGGAAGGGAAACTTATGGAAGCTAAGTTTGTGTTGGTTCAAATGAGACAAGCAGGGTTTGAACCTGACATTGTGGTCTATAATAATTTGCTTAATGGGTATGCAGTTGCTGGGAAGATGGCGGATGCGTATGATCTCTTGCAAGAGATGAGGAGGAAGGGTTGTGAGCCAAATGCAGCATCCTATACTGTATTGATCCAGGCGCTTTGTAGTATGGAGAAGACTGAGGAAGGCATGAGGGTCTTTGTGGATATGGAAAGAAGTGGTTGTGATGCTGATGTTGTGACTTATAATGCCCTTATTAGTGGACTATGCAAGTGGCGCAAGATTGATAAAGCTTATCAGCTTTTGGATTCTATGCTACAGAGAGGACATAGTCCTGATCAAACTACCTATCTACATATACTTCTAGCTCATGAGAAGAAGGAAGAATTTGAACAGTGTGTGGAACTTGTGGAAGGGATGAGGAAGATCAATTGCTTTCCAGATACTAAGATATACAATACCTTGATCCGTTTAGCATACAAGCTTGGAGAGGTGAAAGAGGGCGTTCGACTATGGAACGAGATGGAGGCAAGTAGGCTTAGTCCTGGACTAGATAGCTTCACTATAATGGTTCATGGCCTTATTGAGCAGGATTGTCTGGTTGAAGCTTGTGACTATTTCAAGGAAATGGTTGCTAGAGGTCTTTTGTCTGCTCCTCGATATGGTACTTTGAAGGATTTATTGAATTCTCTACTACGAGATGACAAACTTGAGTTAGCTAAAGATGTGTGGGATTGTATCATAAAAAAGGGATGTGACTTGAATGTTTATGCATGGACAATTTGGATACATGCACTCTTTTCAAATAAGCATGTGAAAGAGGCTTGCTCTTATTGTTTGGAAATGATGGATGCAGATTTGATGCCACAACCTAGCACTTTTGCAAAGCTGATGAAGGGCTTAAGGAAACTGTACAACAGACAAATTGCTGCAGAGATTACGGAAAAAGTGAGAAAGATGGCAGCAGATAGACAGATTACCTTCAAAATGTACAAACGTAGGGGAGAGAGAGACTTGAAGGAGAAAGCTAAGGCTAAAATTGATGGAAGGAAAAGGCGGGCTAGACGACGACGTTGGGGCGGAGGTCGTAGTAAAGCTGATCTTGTGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98159.p1 GENE.S_Transcript_98159~~S_Transcript_98159.p1 ORF type:complete len:655 (+),score=130.94,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|8.4e-08,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|4.5e-18,PPR_2|PF13041.2|9.2e-12,PPR_2|PF13041.2|3.8e-14,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.00016,PPR|PF01535.16|0.033,PPR|PF01535.16|0.0036,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|0.0035,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|55,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0032,PPR|PF01535.16|2.6,PPR|PF01535.16|0.08,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|4.6e-10,PPR_1|PF12854.3|0.00035,PPR_1|PF12854.3|5.3e-08,PPR_1|PF12854.3|1.7e-06,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|2.7e+03,PPR_1|PF12854.3|0.0084,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0097,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.0061,PPR_3|PF13812.2|0.86,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.00033,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1e+02,MRP-S27|PF10037.5|2.8e-05,MRP-S27|PF10037.5|9.4e+02,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|58 S_Transcript_98159:202-2166(+)
MRRLSLKLFSLYNNCHPSLVTTESLAQTILTANFSNLSATHNIKPSNRSPDINPNSNVDRKSGFGFVQLDSNPQNMTHDRNFDEFEVDVEKIYRILRKFHSRVPKLELALQESGMVMRSGLTERVLNRCGDAGNLAYRFFIWASKQPGYRHSFDVYKAMIRALGKMRQFGAVWAIIEEMRRENPLLITPDVFVVLMRRFASARMVKKAVEVLDEMPKYGCEPDDYVFGCLLDALCKNGNVKEAASLFEDMRTRFPPTIKHFTSLLYGWCKEGKLMEAKFVLVQMRQAGFEPDIVVYNNLLNGYAVAGKMADAYDLLQEMRRKGCEPNAASYTVLIQALCSMEKTEEGMRVFVDMERSGCDADVVTYNALISGLCKWRKIDKAYQLLDSMLQRGHSPDQTTYLHILLAHEKKEEFEQCVELVEGMRKINCFPDTKIYNTLIRLAYKLGEVKEGVRLWNEMEASRLSPGLDSFTIMVHGLIEQDCLVEACDYFKEMVARGLLSAPRYGTLKDLLNSLLRDDKLELAKDVWDCIIKKGCDLNVYAWTIWIHALFSNKHVKEACSYCLEMMDADLMPQPSTFAKLMKGLRKLYNRQIAAEITEKVRKMAADRQITFKMYKRRGERDLKEKAKAKIDGRKRRARRRRWGGGRSKADLVI*

Click here to download the sequence:
Link to NCBI Protein BLAST