Transcript Information: S_Transcript_98184.p1


Annotated TAIR IDAT1G80070.1
Annotated Gene NamePre-mRNA-processing-splicing factor
Annotated Gene Symbol(s)SUS2, EMB33, EMB177, EMB14
Annotation TypeOrtholog
Chromosome Positionchr1:30118052-30127574 | Forward length=2359
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.008991822873
Replicate 232.579136192952
Replicate 333.370706249741
Condition 2: 8 Hour
Replicate 140.360745086628
Replicate 239.578041226817
Replicate 337.248448467618
Condition 3: 24 Hour
Replicate 132.192459880876
Replicate 230.792385762261
Replicate 328.926130722676


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98184.p1 GENE.S_Transcript_98184~~S_Transcript_98184.p1 ORF type:complete len:2356 (+),score=424.49,PROCN|PF08083.7|3.7e-235,PRP8_domainIV|PF12134.4|9.6e-130,U6-snRNA_bdg|PF10596.5|2.4e-94,U6-snRNA_bdg|PF10596.5|0.046,PRO8NT|PF08082.7|3.3e-86,U5_2-snRNA_bdg|PF10597.5|4.5e-73,PROCT|PF08084.7|4.1e-51,RRM_4|PF10598.5|2.1e-47,JAB|PF01398.17|1.3e+03,JAB|PF01398.17|4.6e-07 S_Transcript_98184:246-7313(+)
ATGTGGAACAACAACCAGCCACCGGCCCCGCCGGGGACATCGCTACCACCACCACCAGCGATGCAACCGTCGTACACGGTCTTACATCCACCACAACCGCCACCTCAGCTGCAGGAGTCACCTGCAGATGCGGAGGCCAGGCTGGAGGAAAAGGCTCGTAAATGGATGCAGCTTAACTCCAAGCGTTATGGCGATAAGCGCAAGTTCGGCTTCGTCGAGACTCAGAAGGAGGACATGCCTCCTGAGCACGTCCGCAAGATTATTAGAGATCACGGTGACATGTCGTCTAAAAAATATCGTCATGATAAACGTGTTTACCTTGGCGCTCTGAAGTTTGTTCCACATGCTGTCTATAAGCTTCTCGAGAACATGCCGATGCCCTGGGAACAGGTTCGTGATGTCAAAGTTCTATATCATATTACTGGAGCAATCACATTTGTAAATGAAATACCTTGGGTTGTTGAGCCCATCTATCTGGCTCAGTGGGGTACAATGTGGATCATGATGCGAAGAGAGAAGAGAGACCGTCGGCACTTCAAAAGAATGAGGTTCCCTCCTTTTGACGATGAGGAGCCTCCACTGGATTATGCTGATAATGTTCTGGATGTTGATCCTTTGGAACCCATTCAGCTGGAGTTGGATGAAGAAGAAGATTCTGCTGTCTGCACGTGGTTTTATGATCATAAACCTCTTGTCAAGACAAAGCTAATTAATGGGCCAAGTTATAGGAGATGGCATCTCTCCCTTCCAATAATGGCAACTCTCTATCGTTTTGCTGGGCAGTTGCTTTCTGATTTGGTGGACCGGAACTACTTCTACTTGTTCGACATGGAATCGTTTTTTACTGCAAAAGCATTGAACATGTGCATACCTGGAGGTCCTAAGTTTGAGCCTTTGTATCGTGACATGGAAAAAGGGGATGAGGACTGGAATGAGTTCAATGATATCAACAAACTCATTATCCGGTCACCACTTCGGACTGAGTATAGAATTGCATTTCCTCATCTCTACAATAATAGACCGAGGAAAGTTCGACTTGGTGTATATCATAGTCCTATGATTATGTATATAAAAACTGAAGATCCAGATCTCCCAGCATTTTATTATGATCCACTCATTCACCCTATAACTACCTCTCATAAGGATCGCCGGGAGAAAAAAGTGTATGAAGAGGAGGATGATGATGATTTCGAGCTTCCTGAAGGTGTTGAACCATTGCTCACTGACACCCAGCTTTACACGGACACTACAGCTGCAGGAGTCTCACTGTTGTATGCACCAAGGCCATTCAACATGAGATCTGGTCGCACACGACGTGCTGAAGATATACCCCTTGTCTCAGAGTGGTACAAGGAGCATTGCCCTCCTTCATATCCTGTTAAAGTTCGAGTCAGCTATCAGAAGTTGCTAAAATGTTTTGTGCTGAATGAGTTGCATCACAGACCACCAAAAGCCCAGAAGAAGAAGCATCTTTTCAGATCTCTTGCAGCTACCAAGTTTTTCCAGAGTACTGAACTAGATTGGGTTGAAGCTGGTCTCCAGGTATGCAGGCAAGGATACAACATGCTAAACCTGCTGATTCACAGGAAGAATTTGAACTATCTGCATCTTGATTATAATTTCAATCTGAAGCCTGTTAAGACGCTTACTACTAAGGAACGTAAAAAGTCGCGGTTTGGAAATGCGTTTCATCTTTGTCGTGAAATCCTTCGGTTAACAAAGCTTGTAGTTGATGCCAATGTTCAATTTCGCTTGGGCAATGTGGATGCCTTCCAATTAGCTGATGGTTTGCAGTACATATTTTCACATGTTGGGCAGCTGACTGGTATGTATCGTTACAAGTATAGACTCATGAGACAGATCAGAATGTGCAAGGACTTGAAGCACTTGATTTATTACCGTTTTAACACCGGGCCAGTTGGGAAGGGGCCTGGATGTGGTTTCTGGGCACCGATGTGGAGGGTCTGGCTCTTCTTCCTTCGTGGTATTGTGCCGTTGCTGGAAAGATGGTTAGGAAATCTACTTGCTAGACAATTTGAGGGTCGTCATTCCAAAGGTGTGGCAAAAACAGTTACTAAACAGCGTGTGGAAAGCCACTTTGATCTAGAGCTTCGAGCTGCGGTTTTGAACGATGTGCTTGATGCCATGCCAGAGGGGACTAAGCAAAATAAGTCAAGAACCATCCTGCAGCATCTAAGTGAAGCTTGGCGCTGTTGGAAAGCAAACATTCCCTGGAAAGTTCCAGGTTTGCCTGTTCCCATTGAAAATATGATCCTTCGTTATGTCAAGGCAAAAGCTGATTGGTGGACGAATGTTGCTCATTACAATCGTGAACGTATCAGAAGGGGAGCAACAGTTGATAAGACAGTTTGTCGTAAGAATCTTGGGAGGTTGACTCGTTTGTGGCTGAAGGCAGAGCAAGAACGTCAGCACAATTATCTGAAGGATGGTCCATATGTTACACCGGAAGAAGCTGTAGCTATTTATACCACAACTGTGCATTGGCTAGAGTCAAGAAAGTTCTCTCCTATACCATTCCCTCCTCTGTCTTATAAGCACGACACCAAGCTGCTTATCCTTGCTCTGGAGAGGTTAAAGGAATCTTATAGTGTTGCTGTTAGATTGAACCAACAGCAAAGAGAAGAACTGGGTCTTATTGAACAGGCTTATGATAACCCTCATGAAGCTTTGTCAAGAATCAAGCGTCACCTGCTCACCCAGCGTGCATTTAAAGAAGTAGGGATTGAGTTCATGGATCTTTATAGCTATCTCATTCCTGTCTATGAGATTGAGCCACTTGAAAAGATTACTGATGCCTATCTTGACCAGTATCTATGGTATGAAGGTGACAAGAGGCATCTGTTCCCTAACTGGGTCAAGCCTGCGGATACTGAGCCTCCGCCACTTTTGGTATACAAATGGTGCCAGGGGATTAACAATCTGCAAGGTATATGGGATACTAGTGAGGGGCAGTGTGTGGTGATGCTCCAAACCAAATTTGAGAAGTTCTTTGAGAAGATTGATTTGACCATGCTTAACAGACTACTTCGTTTGATCCTTGATCACAATATTGCTGACTATGTTACTGCAAAGAACAACGTGGTGCTGTCCTACAAGGACATGAGTCATACCAATTCATATGGGCTGATACGTGGGCTTCAGTTTGCCTCGTTTGTTGTACAGTATTATGGTCTTGTGCTTGATCTTCTTCTCCTAGGATTGACTAGAGCCAGTGAAATCGCTGGTCCACCTCAAATGCCAAATGAGTTTATGACTTATTGGGATACCAAGGTGGAAAGTAGACACCCTATCCGGCTGTATTCTCGTTATATTGACAAGGTGCATATATTGTTCCGCTTCACCCATGAAGAAGCACGGGATCTTATCCAGCGGTACCTTACTGAGCATCCTGATCCCAACAATGAGAATATGGTGGGATACAACAACAAGAAGTGTTGGCCAAGAGATGCTCGTATGAGACTCATGAAGCATGATGTTAACTTGGGTAGAAGTGTCTTCTGGGACATGAAGAATCGCCTTCCACGGAGTATAACTACCTTAGAATGGGAGAACAGTTTTGTGTCTGTCTACAGCAAGGACAATCCTAACTTGCTTTTCAGCATGTGTGGGTTTGAGGTACGGATATTGCCTAAGGTAAGGATGACACAAGAGGCATTCAGCAATACAAAAGATGGGGTCTGGAACTTGCAGAATGAACAGACCAAAGAGCGAACTGCTGTTGCTTTCTTGAGGGTTGATGACGAACACATGAAGGTATTTGAAAATAGGGTGAGGCAGATTCTTATGTCTTCAGGATCTACAACGTTCACCAAAATTGTCAACAAATGGAACACTGCACTCATTGGTCTTATGACCTATTTCCGTGAAGCAACTGTGCATACTCAGGAGCTGTTGGACTTGCTGGTGAAGTGTGAGAACAAAATCCAGACTCGTATTAAGATCGGTTTGAACTCAAAAATGCCTAGCAGGTTTCCTCCTGTTATTTTCTATACACCAAAGGAAATTGGAGGTCTTGGTATGCTGTCAATGGGTCACATTCTGATTCCCCAAAGTGACCTTCGGTACAGCAAACAGACTGATGTTGGTGTGACTCACTTTAGGAGTGGGATGAGCCATGAAGAGGATCAGCTCATACCAAATCTATATCGCTACATACAGCCATGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAGTATGCGCTGAAGAGGCAGGAAGCTCAGTCACAGAATAGGCGTTTAACACTCGAGGATCTGGAAGATTCCTGGGATCGTGGTATACCACGAATCAATACATTGTTTCAAAAGGATCGCCATACTTTGGCATATGACAAAGGATGGAGAGTCCGTACTGATTTTAAGCAATACCAAGTCTTGAAGCAGAACCCATTCTGGTGGACTCATCAGCGTCATGATGGGAAGCTGTGGAACTTGAACAATTACAGAACTGACGTCATTCAGGCACTAGGAGGAGTTGAAGGAATTCTGGAGCATACTTTGTTCAAGGGAACATATTTCCCAACATGGGAGGGTCTTTTCTGGGAAAAGGCATCTGGTTTCGAGGAGTCCATGAAGTACAAGAAATTGACAAATGCTCAAAGGTCTGGTTTGAACCAGATTCCCAACCGTAGGTTTACCCTCTGGTGGTCTCCTACAATCAATCGGGCAAATGTCTATGTGGGTTTCCAGGTGCAACTTGATCTGACTGGAATATTTATGCATGGAAAGATCCCGACATTGAAGATATCGCTGATTCAGATATTCCGAGCACATCTATGGCAGAAAATCCATGAAAGTGTTGTCATGGATCTTTGTCAAGTTCTGGATCAGGAGTTGGATGCCTTGGAAATTGAGACAGTTCAAAAGGAAACAATTCATCCTAGGAAAAGTTACAAAATGAATAGTTCCTGTGCTGACGTACTTCTCTTCGCAGCACATAGATGGCAAATGTCAAAACCCAGTCTGGTTGCAGAGACAAAAGATGTATTTGACCAGAAGGCCAGCAACAAGTACTGGATAGATGTGCAGCTCCGTTGGGGAGATTATGATTCTCATGATATTGAGCGTTACACTAGAGCTAAATTCTTGGATTACACCACAGATAACATGTCCATCTATCCATCACCAACCGGAGTGATGATTGGGATAGATCTTGCTTACAACTTGCATTCTGCTTTCGGCAACTGGTTCCCTGGGTCAAAACCATTGCTTGCACAAGCCATGAATAAGATCATGAAGTCAAATCCTGCGCTGTATGTCTTGAGAGAACGTATAAGAAAAGGTCTTCAGTTGTACTCTTCTGAGCCTACTGAGCCATACTTGTCGTCCCAAAACTATGGAGAGATTTTCAGTAATCAAATCATATGGTTTGTTGATGATACTAATGTCTACCGAGTCACAATCCACAAGACTTTTGAAGGAAATCTGACCACAAAACCTATCAATGGAGCCATATTCATATTTAATCCACGGACTGGGCAACTCTTTTTGAAGGTTATTCACACCAGTGTTTGGGCTGGACAGAAGCGTCTAGGTCAGTTGGCTAAGTGGAAAACAGCTGAAGAAGTTGCAGCTCTTGTTCGGTCTTTACCAGTTGAGGAACAGCCAAAACAGATTATTGTGACACGTAAAGGAATGTTGGATCCACTTGAAGTCCACTTGCTTGATTTCCCAAACATAGTTATCAAAGGAAGTGAGCTGCAACTTCCTTTCCAGGCTTGCTTAAAGATTGAGAAATTTGGTGATCTCATTCTGAAGGCAACAGAGCCACAGATGGTGTTGTTCAACATTTATGATGATTGGCTGAAGAGTATTTCTTCATACACAGCATTCTCTCGGCTAATTCTCATTTTGCGTGCACTTCATGTCAATAATGAGAAGGCAAAAATGTTGCTGAAGCCCGACAGGACTGTTGTCACCGAACCGCATCACATCTGGCCATCACTTACTGATGATCAGTGGATGAAGGTTGAGGTGGCTTTGAGAGATCTTATACTTTCCGATTATGCCAAGAAGAATAATGTGAACACATCTGCGTTAACACAATCTGAAATTCGGGATATCATTCTTGGAGCAGAAATCACTCCTCCCTCTCAGCAGAGGCAGCAGATTGCTGAGATCGAGAAGCAGGCTAAGGCCACAAATCAACTGACGGCAGTCACAACTAGGACGACAAATGTGCATGGTGATGAATTAATCGTCTCCACAACAAGTCCCTATGAGCAGGCAGCCTTTGGCTCTAAGACTGACTGGCGTGTCAGAGCAATTTCTGCAACAAATCTCTACCTTCGTGTGAACCATATTTATGTTAACTCAGAGGACATAAAGGAGACGGGTTACACTTACATCATGCCTAAGAACATTTTGAAGAAGTTCATCTGCATAGCTGATCTGAGGACACAGATTTCTGGGTACTTGTATGGTATAAGCCCTCCTGACAACCCCCAGGTCAAAGAGATCCGCTGCATTGCCATGCCACCTCAATGGGGAACTCATCAGCAGGTGCATCTTCCTTCACAGCTGCCTGAGCACGATTTCCTGAATGATTTGGAACCCTTGGGGTGGATGCACACACAACCAAATGAACTGCCTCAGCTATCACCACAGGATGTCACAAGTCATGCTCGCATCTTGGAGAACAATAAACAGTGGGATGGCGAGAAATGCATCATCCTCACATGCAGTTTTACTCCTGGTTCATGTTCATTGACTGCATACAAGCTCACCCCATCGGGGTACGAGTGGGGACGTGCTAACAAGGATACTGGAAGTAACCCGCATGGTTATCTTCCAACTCACTATGAGAAAGTCCAGATGCTTCTTAGTGATCGGTTCCTCGGTTTCTATATGATACCTGATAGCAGCCCCTGGAATTACAACTTTATGGGAGTGAAGCATACAGTGAGCATGAAATATGGTGTCAAGCTCGGTGCACCAAGGGAGTACTATCACGAGGACCATAGACCTACTCATTACTTGGAATTCAGTAACATGGAAGAGGGTGATACCGCCGAAGGAGATAGAGAGGACACATTTACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98184.p1 GENE.S_Transcript_98184~~S_Transcript_98184.p1 ORF type:complete len:2356 (+),score=424.49,PROCN|PF08083.7|3.7e-235,PRP8_domainIV|PF12134.4|9.6e-130,U6-snRNA_bdg|PF10596.5|2.4e-94,U6-snRNA_bdg|PF10596.5|0.046,PRO8NT|PF08082.7|3.3e-86,U5_2-snRNA_bdg|PF10597.5|4.5e-73,PROCT|PF08084.7|4.1e-51,RRM_4|PF10598.5|2.1e-47,JAB|PF01398.17|1.3e+03,JAB|PF01398.17|4.6e-07 S_Transcript_98184:246-7313(+)
MWNNNQPPAPPGTSLPPPPAMQPSYTVLHPPQPPPQLQESPADAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVDPLEPIQLELDEEEDSAVCTWFYDHKPLVKTKLINGPSYRRWHLSLPIMATLYRFAGQLLSDLVDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVRLGVYHSPMIMYIKTEDPDLPAFYYDPLIHPITTSHKDRREKKVYEEEDDDDFELPEGVEPLLTDTQLYTDTTAAGVSLLYAPRPFNMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVLNDVLDAMPEGTKQNKSRTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKAKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADTEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLILDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFMTYWDTKVESRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKVRMTQEAFSNTKDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWQMSKPSLVAETKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFLDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDRTVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKATNQLTAVTTRTTNVHGDELIVSTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSQLPEHDFLNDLEPLGWMHTQPNELPQLSPQDVTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRANKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMIPDSSPWNYNFMGVKHTVSMKYGVKLGAPREYYHEDHRPTHYLEFSNMEEGDTAEGDREDTFT*

Click here to download the sequence:
Link to NCBI Protein BLAST