Transcript Information: S_Transcript_98236.p1


Annotated TAIR IDAT4G15410.1
Annotated Gene Nameserine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
Annotated Gene Symbol(s)PUX5
Annotation TypeOrtholog
Chromosome Positionchr4:8814868-8816596 | Forward length=421
E-Value8.2E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.988396419545
Replicate 215.476082966315
Replicate 315.443553273889
Condition 2: 8 Hour
Replicate 116.511649298945
Replicate 215.638573806411
Replicate 315.779935726989
Condition 3: 24 Hour
Replicate 120.201215072613
Replicate 217.822997453244
Replicate 315.4270757041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98236.p1 GENE.S_Transcript_98236~~S_Transcript_98236.p1 ORF type:complete len:412 (+),score=87.65,SEP|PF08059.9|6e+03,SEP|PF08059.9|6e-27,UBX|PF00789.16|6.1e-16,UBA_4|PF14555.2|3.7e-13 S_Transcript_98236:252-1487(+)
ATGGCATCACAAGACCAAAACCCTAACGAAAACCTAATCAACATGTTCAAAGAGATAACATCAGCTACAACCCAAGAAGCTCAATTCTACCTCGAAAGCCACAATTTCGACGTCGATGCAGCTGTTTCCACCTTCTTCGAATCATCATCAGCAATGGCTGCCATTCCTCCTGAACTTGAACAACAACAACAACATGAAGAAGAGAATCCTTCGCCTTCTTCTCCTTCGGCCTCTCTCTCTCCTTCTCCATCTCCTTCACCTTCTCGCTCTCGATCGCACTCTCCCCCTCTTGCTGATGCCCAAATTCGATCGCAATATAATCTCCGATCTCGAAGAAACCCTAGCGATTCGGGTCGGGCCAGGAAAACTGGTATTCGGACCTTCTCGGATCTCAATCGGAGTGGCGCTGGTGGTGAGGGTAGTGACTCTGATTCTGATCAACCCCCTCAGTACTTTACTGGTGGCCAGAAAAGTGGAATGCTTGTTCAAGATCCTTCCAAAGGTACCGATATCAATGCACTTTTCGAGCAAGCTAGACAGATGGGAGCTATGCCAGGACCAGCTGATGTTCACCAGCCATCTTCAAGCTCACGAAGTTTTACTGGAACTGCTAGAAAATTATCTGGAGAGACTGTATCTGGTTTACCCGAGCAGCCTCCTGAGGCTGTTACCCATACCATCACCTTTTGGCGCAATGGGTTTACTGTGGATGATGACCCTTTGAGGAGCTTTGATGATCCAGAAAACGCATCGTTTTTGGAGAGCATCAAGAATTCGGAGTGTCCAAGAGAGCTGGAGCCTCTAGACAGGAGGACTTCTGTTCACGTTAATCTCGTGAGGAAGGATGAGAACTGCCCCGAACCAGAAAAGCGAAAAATGTCATTCCAGGGTGCCGGGAGGACACTTGGTACTAGTAGCTCAGTCCCTTCTGAACCCCCTGTTGATGCGGCTGCTGTGCGTGCTGCTCCATCTCCAGTCGCAGGCCTAGTTGTGGATGAAAATTTACCATCGACTTCAATCCAGCTGAGATTGGCTGATGGGACTCGCATGGTCTCACGCTTCAACTACCATCACACAATTAGGGACATTCACGCCTTCATTGATGCATCAAGGCCCGGTAGAGCTGGCACTTACACACTTCAGACGATGGGTTTTCCTCCTAAGAAGCTGACCGAGCTTGATCAGTCGATAGAGCAGGCCAGTCTTGCCAACTCCGTTGTCATCCAGAAATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98236.p1 GENE.S_Transcript_98236~~S_Transcript_98236.p1 ORF type:complete len:412 (+),score=87.65,SEP|PF08059.9|6e+03,SEP|PF08059.9|6e-27,UBX|PF00789.16|6.1e-16,UBA_4|PF14555.2|3.7e-13 S_Transcript_98236:252-1487(+)
MASQDQNPNENLINMFKEITSATTQEAQFYLESHNFDVDAAVSTFFESSSAMAAIPPELEQQQQHEEENPSPSSPSASLSPSPSPSPSRSRSHSPPLADAQIRSQYNLRSRRNPSDSGRARKTGIRTFSDLNRSGAGGEGSDSDSDQPPQYFTGGQKSGMLVQDPSKGTDINALFEQARQMGAMPGPADVHQPSSSSRSFTGTARKLSGETVSGLPEQPPEAVTHTITFWRNGFTVDDDPLRSFDDPENASFLESIKNSECPRELEPLDRRTSVHVNLVRKDENCPEPEKRKMSFQGAGRTLGTSSSVPSEPPVDAAAVRAAPSPVAGLVVDENLPSTSIQLRLADGTRMVSRFNYHHTIRDIHAFIDASRPGRAGTYTLQTMGFPPKKLTELDQSIEQASLANSVVIQKF*

Click here to download the sequence:
Link to NCBI Protein BLAST