Transcript Information: S_Transcript_98239.p2


Annotated TAIR IDAT4G33780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:16202174-16203617 | Reverse length=203
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30945350273466
Replicate 20.7696321938668
Replicate 30
Condition 2: 8 Hour
Replicate 10.24796965485038
Replicate 20.52027554976108
Replicate 30.24785869308118
Condition 3: 24 Hour
Replicate 11.2700513657322
Replicate 20.26353269274822
Replicate 30.586559172212


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98239.p2 GENE.S_Transcript_98239~~S_Transcript_98239.p2 ORF type:complete len:86 (+),score=11.15 S_Transcript_98239:342-599(+)
ATGATATGTTGTGATCAGGAAGGTGATGAGCTGTTCAATGAGAGCCAAAAATGGAATCGATTCGATTTCGACAATTACAGAGATTACGACGACGAAGATGATGAAGAAGAAGAGGAAGAAGAAGATCGGAGTTTAGATTTGCTAGTTAGGTTTGTCGAAAATATCTTCCGAAAAATATCTAAACGAGCTCGTAAGGCCGTTCGTTCCGTTCTCCCTCACGCTATCTCCACCAAATTGGTCCGTTTCCTCTCTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98239.p2 GENE.S_Transcript_98239~~S_Transcript_98239.p2 ORF type:complete len:86 (+),score=11.15 S_Transcript_98239:342-599(+)
MICCDQEGDELFNESQKWNRFDFDNYRDYDDEDDEEEEEEEDRSLDLLVRFVENIFRKISKRARKAVRSVLPHAISTKLVRFLSL*

Click here to download the sequence:
Link to NCBI Protein BLAST