Transcript Information: S_Transcript_98244.p1


Annotated TAIR IDAT4G33780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16202174-16203617 | Reverse length=203
E-Value4.8E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4426189894996
Replicate 27.3854253179816
Replicate 36.8769524379528
Condition 2: 8 Hour
Replicate 115.090424504073
Replicate 217.442458261482
Replicate 314.270779328759
Condition 3: 24 Hour
Replicate 111.75550933604
Replicate 211.908104387572
Replicate 39.8323223952147


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98244.p1 GENE.S_Transcript_98244~~S_Transcript_98244.p1 ORF type:5prime_partial len:236 (+),score=27.52 S_Transcript_98244:3-710(+)
TTAGTGGTGGTGGTGGAACCACACTTTGCCAATAATCAATCCATACTCAATTCAACATCTCACCTAACCAAGCTAACAAGCTTCAATCAAAAATTTTCTTCAATATTAATGGCGATTTCCTCAACCTCTCTCTCTTCTTCTTCTTTATCAAGACTACCTCACCATCATCAACTTCATTTTCCTATTCTCTCTCCTCCTCCTCGCCTTCACTTTCACTTTCAACTTCAACTCCTTCGTACCTTCCCCTATCTTCATGCTTCACGTCGTGAGGAAGGTGACGAGCTGTTCAATGAGAGCCGAAAATGGAATCGATTCGATTTCGACAATTACAGAGATTACGACGACGAAGATGATGAAGAAGAAGAGGAAGAAGAAGATCGGAGTTTAGATTTGCTAGTTAGGTTTGTCGAAAATATCTTCCGAAAAATATCTAAACGAGCTCGTAAGGCCGTTCGTTCCGTTCTCCCTCACGCTATCTCCACCAAATTGGTGGGATTTGCTGTCAATGGATTCATAATCTTGTCATTTTTATGGGTCTTGAAGGCTTTTCTTGAGGTTGTTTGTACGCTTGGAAGTGTTGTCTTTGTGAGCATTTTACTAATCCGTGGAGTATGGTCTGGTGTATTGTACTTACAAGAAAACCGCAATCGTCTAAATGGATTTGATGAGGACCATCCTGCATGGAATGGAGCAGAGCCTGTAACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98244.p1 GENE.S_Transcript_98244~~S_Transcript_98244.p1 ORF type:5prime_partial len:236 (+),score=27.52 S_Transcript_98244:3-710(+)
LVVVVEPHFANNQSILNSTSHLTKLTSFNQKFSSILMAISSTSLSSSSLSRLPHHHQLHFPILSPPPRLHFHFQLQLLRTFPYLHASRREEGDELFNESRKWNRFDFDNYRDYDDEDDEEEEEEEDRSLDLLVRFVENIFRKISKRARKAVRSVLPHAISTKLVGFAVNGFIILSFLWVLKAFLEVVCTLGSVVFVSILLIRGVWSGVLYLQENRNRLNGFDEDHPAWNGAEPVT*

Click here to download the sequence:
Link to NCBI Protein BLAST