Transcript Information: S_Transcript_98248.p1


Annotated TAIR IDAT2G28450.1
Annotated Gene Namezinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12162180-12165761 | Reverse length=809
E-Value3.1E-297
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1320201821327
Replicate 27.1991484536308
Replicate 38.2603321664762
Condition 2: 8 Hour
Replicate 110.212904047659
Replicate 28.4935306250079
Replicate 39.3884936721692
Condition 3: 24 Hour
Replicate 17.4261762734774
Replicate 27.254669214265
Replicate 36.4463289670644


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98248.p1 GENE.S_Transcript_98248~~S_Transcript_98248.p1 ORF type:complete len:806 (+),score=183.97,tRNA_U5-meth_tr|PF05958.7|4.6e+03,tRNA_U5-meth_tr|PF05958.7|1.1e-07,tRNA_U5-meth_tr|PF05958.7|1.4e-07,tRNA_U5-meth_tr|PF05958.7|1.1e+03,Methyltransf_31|PF13847.2|2.3e-12,Methyltransf_18|PF12847.3|6.5e-07 S_Transcript_98248:423-2840(+)
ATGACTTCATCACCTGATACCAAAACCTCAACAATGGACACTCAAAACCCTTCCACAGCAACCGAACCCGACTCCGAAACGGGTCAGAAACGCAAGAGAGAAGAAGACCCGGAAACCCAAATCGGGTCGGACCCAAAAAAGCCCGTTCACCCACTTTACAAGACAAGCTTGTGCTCCTACTACAGGGGCCGTTCTGGGGTTTGCAGCCATGGTGATGGCTGCCGGTTTGCCCATTCTGAGGAGGAGCTCCGGCCCAGGCCCGACGGGTCGTGGGACCCGACATCGGAACGGGCCAAGAGAGAGAAGGGTGAGGATGAAAGTGAAGAAGATGAAAGTGTTGTTATGATGACTGAAATGTTGGGGGAATCTGTTGGTGACCCTCAGCTTAGCAAGTGTTTGATTCATTTGCCTAGGAACTGGGATTCTGATAAGTTGAAGAGTTGTCTTGATGAGCAGGGTGTCATGTACAAATCAGCTAAGAAGAAAAGAGGCATGTCAGTGGCTTTCATAAGTTTTGAAGCTGCAGAACAAGTAAAAAGTTCAACAGAGGTGTTACAAGGAAAAACTCTTGGCAACAAGAAGCTGAAGTTTGGGGATGTGATTCCCAGGTCTTATGATGATAAGATAAAATCTGCTGAGAAAAGTTACTTAAATGTACAAGCTGGAGGAGTTGACGAATCAGAAGTGTCGGTGATTTCACTTGATGGTGAAAATGGAGATGAAGTGAATGGTTCGGGTTTAAGGGCAAAGTCTGCTCGTGATGTTGTGGCACCTCTCGCTCATATGCCATATGCTGAACAACTGGAGCAAAAAAAGAACTCTCTGATGCAAATTCTCAAAAGACTTACTCGAAATGCACGTAAAGCATGTCCAAAGGGGGTTCCACTACCAGATTGGGTCGTCAAATCTAGAGAAATAGGTGGTCTTCCATGCAAACTGGAGGGCATAATTGAGTCTCCACTCATTAATGGGTATCGTAACAAGTGTGAGTTTTCAGTTGGGTATTCTGTGCAAGGGAAGCCGACGGTGGGTTTTATGCTCGGTAATTTCAGAGAGGGTGTGACGGCAGTTGAGGAGCCTGTTAACTGCCCAAATGTTTCAGGAATTGCATGCAAATATGCCATGATCTTTCAAGAGTTCTTACAGGATTCAACTTTACCAATTTGGAACAGATTTAATAATTCTGGTTTCTGGCGTCAATTGACTGTTCGGGAAGGACGAAATGCACTGCCAGATGCTGAGGTTGAAAGTGAGGCCTATATTTCTGAGGTCATGGTTATGGTTCAGGTGTCTGCAGCAGGACATGATGATGATCTCATAAAAAGTGAACTTCAAAAAATGACGCAAGCATTTGTTACAGGAGCTGCTTCAACTTCTCCTCCTTTGCCTCTAACTGCTTTAGCTCTGCAGGATCACGTTGGAATATCCAATGCAGCTCCTCCTGATGCCCCATTGCGTCCATTGCCAATAACTACTTCAGAAATGAGTTCTGGAGAAGAGGTGGTCAATATTTCCAATGACATCAGAATTCATGACTATATTGGCAGTCTTCAATTCTCCATATCCCCGACCGCATTCTTTCAGGTTAACACACTTGCTGCAGAGAAGCTATATTCTCTTGCTGGAGATTGGGCTGGCCTAGGCCCAGATACCTTACTTTTTGATGTATGCTGTGGGACTGGCACTATTGGCCTGACCTTAGCCAACCGTGTTGGTATGGTAGTGGGCATTGAGATGAATGCTTCAGCAGTGTCTGATGCACAAAGGAATGCTGAGATAAATGGCATCACAAACTGTAAATTCATTTGTTCCAAGGCTGAGGATGTCATGGGACCTTTACTGAGGGAATACGTCGATTCAACAGAGCAACAAGATGAGCCTTCAAATCCTTCAGATAACAATGAAAAACAGAATGAGACAGCAGATAATTTAAATGCAGCACTGGATGCTGGGGAGTGCTTGAATGAAGAGAGCGTGGGAAGTGAGGATGCGGATGGTTCCAGTAACAGCAAACAAGATATACAGAATGATGTCGAGAGGAATACAGTTAAAGCTAGGCGTGACACAAAGCAGCGATTCAAAAATGTTGTTGCTATAGTTGATCCTCCGCGTTCTGGACTTCACCCTGTCGTCTTGAAAGCTCTGAGGACTCATCCACGTCTATGGAGGCTTGTGTACATTTCCTGCAACCCTGAAACATTGGTGGCGAATGCTATTGAACTGTGCACGCCATTGGCTCAAAAGTCAGAGAAAGGGGGCAAAAACCAAGGATGGAGGAACATGAGTAATGCTAGTCTGGCCCGTCATAGGTTGAAGTCCATGCCTATGTCAGAACCTTTTCAGCCCGTCAAAGCCATGGCAGTCGATTTGTTTCCTCATACACCGCACTGTGAATTGGTAATGCTGCTCGAGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98248.p1 GENE.S_Transcript_98248~~S_Transcript_98248.p1 ORF type:complete len:806 (+),score=183.97,tRNA_U5-meth_tr|PF05958.7|4.6e+03,tRNA_U5-meth_tr|PF05958.7|1.1e-07,tRNA_U5-meth_tr|PF05958.7|1.4e-07,tRNA_U5-meth_tr|PF05958.7|1.1e+03,Methyltransf_31|PF13847.2|2.3e-12,Methyltransf_18|PF12847.3|6.5e-07 S_Transcript_98248:423-2840(+)
MTSSPDTKTSTMDTQNPSTATEPDSETGQKRKREEDPETQIGSDPKKPVHPLYKTSLCSYYRGRSGVCSHGDGCRFAHSEEELRPRPDGSWDPTSERAKREKGEDESEEDESVVMMTEMLGESVGDPQLSKCLIHLPRNWDSDKLKSCLDEQGVMYKSAKKKRGMSVAFISFEAAEQVKSSTEVLQGKTLGNKKLKFGDVIPRSYDDKIKSAEKSYLNVQAGGVDESEVSVISLDGENGDEVNGSGLRAKSARDVVAPLAHMPYAEQLEQKKNSLMQILKRLTRNARKACPKGVPLPDWVVKSREIGGLPCKLEGIIESPLINGYRNKCEFSVGYSVQGKPTVGFMLGNFREGVTAVEEPVNCPNVSGIACKYAMIFQEFLQDSTLPIWNRFNNSGFWRQLTVREGRNALPDAEVESEAYISEVMVMVQVSAAGHDDDLIKSELQKMTQAFVTGAASTSPPLPLTALALQDHVGISNAAPPDAPLRPLPITTSEMSSGEEVVNISNDIRIHDYIGSLQFSISPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDVCCGTGTIGLTLANRVGMVVGIEMNASAVSDAQRNAEINGITNCKFICSKAEDVMGPLLREYVDSTEQQDEPSNPSDNNEKQNETADNLNAALDAGECLNEESVGSEDADGSSNSKQDIQNDVERNTVKARRDTKQRFKNVVAIVDPPRSGLHPVVLKALRTHPRLWRLVYISCNPETLVANAIELCTPLAQKSEKGGKNQGWRNMSNASLARHRLKSMPMSEPFQPVKAMAVDLFPHTPHCELVMLLER*

Click here to download the sequence:
Link to NCBI Protein BLAST