Transcript Information: S_Transcript_98390.p1


Annotated TAIR IDAT2G19570.1
Annotated Gene Namecytidine deaminase 1
Annotated Gene Symbol(s)CDA1, AT-CDA1, DESZ
Annotation TypeOrtholog
Chromosome Positionchr2:8470598-8471503 | Reverse length=301
E-Value2.5E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.287593360262
Replicate 223.133798759336
Replicate 318.502421313645
Condition 2: 8 Hour
Replicate 114.492983710673
Replicate 212.525339206061
Replicate 315.176331628142
Condition 3: 24 Hour
Replicate 117.815244788446
Replicate 218.84983681269
Replicate 316.243323095852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98390.p1 GENE.S_Transcript_98390~~S_Transcript_98390.p1 ORF type:complete len:309 (+),score=59.54,dCMP_cyt_deam_2|PF08211.7|1e+04,dCMP_cyt_deam_2|PF08211.7|1.4e-47,dCMP_cyt_deam_1|PF00383.18|3.2e-10,dCMP_cyt_deam_1|PF00383.18|2.4 S_Transcript_98390:282-1208(+)
ATGGAGCACCTCAAATTTGTCATTGAGGCAGCAGAAGCAGAAACAATGGCAAAAAAATTAGGCCTGAAATCAGTCTTAAATCTTCTTCCAAGAATCGTAAGATCTGCCCAGAAACTTGCTCGTCCAGTCATCTCAAAATTCTGTGTCTCAGCAGCCGGTTTAGCCTCAGACGGTCGAATATTCCTTGGTGTAAACATCGAATTCCCAGGTTTACCCCTTCACCATTCAATCCATGCTGAACAATTTCTCATCACAAATGTGTCTCGTTTCCCTCAAACCCGCCTCACAAACGTCGTCGTTTCTGCATACCCATGTGGGCATTGTCGTCAATTTCTCCAAGAAATCCGAGGTGCCCCAGAAATCCAAATCTGGGTTCTTCAAAATGACAAAATTCATGGATACCCAGATGATCAAAATCACACCTTTAAGCCTCTGTCATATTTTTTGCCCCACAGATTTGGCCCAGATGATTTACTAGACAATAGAGTTCCCTTATTATTGGAGCCCCAAGAGAATAATTTGGTACTTGTTGATGAAATTAATGGCAAAATGGTAAATGGGTTTTCAACATTTGATGATAAAGATTTGGTGTTTGAAGCATTAGAAGCAGCTAATAGGTCACATGCTCCTTATAGTGGGTGCCCATCTGGGGTTTCATTAATTGATATTGATGGGAAAATATTCAAAGGATGTTACATGGAATCTGCTGCTTATAATCCCAGTCTTAGCCCTGCTCAAGCTGCTATTATTGCCTATGTGGCAGCTGGTGGTGATGGCTATGATAGATTTGTGAGTGCTGTTTTGGTTGAGAAAGAAGATGCCATTGTTAAACAAGAAGATACTGTCAGCTTGTTCTTGAGGGCTGTTTCTCCCAATTGTCATTTCCATGTCTTTCATTGCAAGTCTTCTTTAGCTAAAGAAAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98390.p1 GENE.S_Transcript_98390~~S_Transcript_98390.p1 ORF type:complete len:309 (+),score=59.54,dCMP_cyt_deam_2|PF08211.7|1e+04,dCMP_cyt_deam_2|PF08211.7|1.4e-47,dCMP_cyt_deam_1|PF00383.18|3.2e-10,dCMP_cyt_deam_1|PF00383.18|2.4 S_Transcript_98390:282-1208(+)
MEHLKFVIEAAEAETMAKKLGLKSVLNLLPRIVRSAQKLARPVISKFCVSAAGLASDGRIFLGVNIEFPGLPLHHSIHAEQFLITNVSRFPQTRLTNVVVSAYPCGHCRQFLQEIRGAPEIQIWVLQNDKIHGYPDDQNHTFKPLSYFLPHRFGPDDLLDNRVPLLLEPQENNLVLVDEINGKMVNGFSTFDDKDLVFEALEAANRSHAPYSGCPSGVSLIDIDGKIFKGCYMESAAYNPSLSPAQAAIIAYVAAGGDGYDRFVSAVLVEKEDAIVKQEDTVSLFLRAVSPNCHFHVFHCKSSLAKEN*

Click here to download the sequence:
Link to NCBI Protein BLAST