Transcript Information: S_Transcript_98414.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.399532898254
Replicate 23.4360082097769
Replicate 33.9304191653575
Condition 2: 8 Hour
Replicate 12.9715707818956
Replicate 23.3007645534023
Replicate 33.6691213090542
Condition 3: 24 Hour
Replicate 15.1926362395675
Replicate 23.5296099995951
Replicate 33.1010710334159


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98414.p1 GENE.S_Transcript_98414~~S_Transcript_98414.p1 ORF type:5prime_partial len:122 (+),score=15.04 S_Transcript_98414:2-367(+)
GAGAAGAAGTTGCAAGAAGCGGTGCTAGAGAGGGACAATAAGCTGAGAGAAGAGTTCATACAGCTCATGCGTATATACAGGTATGTTCCATACATTTATCTCACTTTAACTCCTTCCTCTCTCTATCTCTATGTCCTTCATTCTTTCTGTCTTTCTCTATCTCTCTGTCCTTCATTCTGTCTCTCTCCATCTCTGTGTCCCTCATTTTGTCTCTCTCCATTTCTCCATCCCTCATTCTCTCTCTGTCTTTCTCTATCTTTCTGTCCCTCATTCTCTCTCTCCCCATCTCTTTATCCCTCATTTTGTCTCTCTCCATCTCTCTGTCCTATGTTGAATTATAATCTTCTTATTTGTTTGATTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98414.p1 GENE.S_Transcript_98414~~S_Transcript_98414.p1 ORF type:5prime_partial len:122 (+),score=15.04 S_Transcript_98414:2-367(+)
EKKLQEAVLERDNKLREEFIQLMRIYRYVPYIYLTLTPSSLYLYVLHSFCLSLSLCPSFCLSPSLCPSFCLSPFLHPSFSLCLSLSFCPSFSLSPSLYPSFCLSPSLCPMLNYNLLICLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST