Transcript Information: S_Transcript_98586.p4


Annotated TAIR IDAT5G48460.1
Annotated Gene NameActin binding Calponin Homology (CH) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19636225-19639365 | Reverse length=654
E-Value2.4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.702882937948
Replicate 23.6196764117798
Replicate 32.4494258861032
Condition 2: 8 Hour
Replicate 13.9985106844624
Replicate 25.5929621599317
Replicate 35.6620220200732
Condition 3: 24 Hour
Replicate 11.7066315227027
Replicate 23.0100374749836
Replicate 35.7143694355341


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98586.p4 GENE.S_Transcript_98586~~S_Transcript_98586.p4 ORF type:5prime_partial len:128 (+),score=24.27 S_Transcript_98586:1-384(+)
CAAAACAGTCATAATTTGAATTCTCTCCAAGAAAACAGCTTTGCTCCACTGACAGCTCTGCCTTCGTCCTTCTTCATTCCTCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTACTCCCAACCAAACCAAACTCTTCACTCTCACAGAAAGAGGAGAAAAGAGAGAGAAATCGATCAAATATATATCAGCTTGAAAGGTGCAAGGAAAATGGCTATGGCAGGTTACGTAGGTATTCTGGTATCAGATCCATGGCTTCAGAATCAGTTCACTCAAGTCGAGCTTCGCAGCTTGAAATCTCAGTACCATACGATGAGGAGAGAGAGTGGACCTCTCAATCTAGCCGATTTGCCGTTAAAGATGTCCAACCTCAAGGTCGTCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98586.p4 GENE.S_Transcript_98586~~S_Transcript_98586.p4 ORF type:5prime_partial len:128 (+),score=24.27 S_Transcript_98586:1-384(+)
QNSHNLNSLQENSFAPLTALPSSFFIPPPPSLSLSLSLLPTKPNSSLSQKEEKRERNRSNIYQLERCKENGYGRLRRYSGIRSMASESVHSSRASQLEISVPYDEEREWTSQSSRFAVKDVQPQGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST