Transcript Information: S_Transcript_98588.p2


Annotated TAIR IDAT5G48460.1
Annotated Gene NameActin binding Calponin Homology (CH) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19636225-19639365 | Reverse length=654
E-Value1.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27578239621949
Replicate 20.34294491540179
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.23183262839095
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.7045744531507
Replicate 30.26136833580431


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98588.p2 GENE.S_Transcript_98588~~S_Transcript_98588.p2 ORF type:complete len:193 (+),score=21.52 S_Transcript_98588:198-776(+)
ATGGCTATGGCAGGTTACGTAGGTATTCTGGTATCAGATCCATGGCTTCAGAATCAGTTCACTCAAGTCGAGCTTCGCAGCTTGAAATCTCAGTACCATACGATGAGGAGAGAGAGTGGACCTCTCAATCTAGCCGATTTGCCGTTAAAGATGTCCAACCTCAAGGTCGTCGGTGAAAACCTAACTGAACAAGAGAGAGAATCGTTTCTTCGCTCTTCGTATCAGAACTTGAATGATGAGGTCGATTTTGAGCTCTTTCTTCGGGTGTATTTACAACTGCATGCACACGCAAGTTCAAAAATGGGCAGTCCAGCGAAGAACTCATCAGCATTTCTCAAAGCTGCTACTACTACATTGCTTCACACAATTAGCGAGTCTGAAAAATCATCTTATGTCACACACATCAACAATTATCTCGGAGAAGACAAGTTCTTGAGGCAATACCTTCCTATAGATCCTTCAACCAATGATCTGTTTGAGATTGTGAAGGATGGCGTTCTTCTCTGGTCTATTCTCTTTGTGTCTTTACTCTTGCATAGCAATTGTCGAAGTCTGCAAGCATGTAGTTCTCTAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98588.p2 GENE.S_Transcript_98588~~S_Transcript_98588.p2 ORF type:complete len:193 (+),score=21.52 S_Transcript_98588:198-776(+)
MAMAGYVGILVSDPWLQNQFTQVELRSLKSQYHTMRRESGPLNLADLPLKMSNLKVVGENLTEQERESFLRSSYQNLNDEVDFELFLRVYLQLHAHASSKMGSPAKNSSAFLKAATTTLLHTISESEKSSYVTHINNYLGEDKFLRQYLPIDPSTNDLFEIVKDGVLLWSILFVSLLLHSNCRSLQACSSLI*

Click here to download the sequence:
Link to NCBI Protein BLAST