Transcript Information: S_Transcript_98859.p1


Annotated TAIR IDAT4G28740.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14201051-14202542 | Forward length=347
E-Value3.4E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.570913209187
Replicate 254.783603608968
Replicate 356.17941145466
Condition 2: 8 Hour
Replicate 152.821351400899
Replicate 252.935235704461
Replicate 357.25764602815
Condition 3: 24 Hour
Replicate 150.411269593679
Replicate 255.508904660839
Replicate 347.727868643527


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98859.p1 GENE.S_Transcript_98859~~S_Transcript_98859.p1 ORF type:complete len:325 (+),score=77.47,DUF3493|PF11998.4|3.4e-27 S_Transcript_98859:173-1147(+)
ATGGCATCAGTGGTCCAATCTGCTCATTTTCTGAGATGGACAAGACCCAGTTTATGCCCAGAAAATGGCAGCTCAAGAATTTGCCCCCAGTTTGTTTTTGGCGGTCATATTTGGGTACCAACTTTAAGGCATGGAGCTAGACGAACTCGTTCTTCTCCTACTATCACCTGCTCTGCTGCCAATAAACCCTCCACTTCTTCGGATGTCAGTTCTACAGCTAAGATACGAAGTGAAGTTCTTTCTCCTTTCCGGTCCCTTCGAATGTTCTTTTACCTTGCTTTTATGGCAAGTGGTGGGCTGGGTGGACTAATAGCTTCCACACAACTGATTGGTGCTCTTGCAAATCCATCAAGAGCAGATCAAGTACCTGAGATACTCAAGGGTCTTGGAATAGATCTTGGTGCAGTTTCTGTATTTGCCTTTCTATATAGTAGAGACAACAAGGCTAAAAATGCACAAATAGCTAGGCTTGTCAGAGAAGAAACTCTTTCTAATCTTAAGGTTCGTATTGATGAGAAGAAGACCATTCCTGTAAGCTCATTGAGGGGGATTGCTCGTCTTGTCATTCTTGCTGGTCCTGGCTCCTTCATCGCAGAGTCCTTTAAGCTTAGTGAGCCTTTCACGGAAGGCCTTTTGGAAAGAGGAGTGCTTGTGGTTCCATTTGCAACTGATGGGGAGTTGCCTGAGTTTGAGTTTGGGAACAACCAAGATATGACTGCGACTAGCAAGAAAAGAAGCCGGCTTTGGCAGTTGGTTCCTTTCAATGTTTCTGAATGGTCCAAGTGGTTAGATGAACAGAAGAAGCTTGCAAATGTCTCTTCTGATTCTCCTGTGTATTTGTCCCTGCGCTTGGATGGGCGTGTTCGAGGCAGTGGAGTTGGTTATCCACCTTGGAATGCATTTGTCGCACAGCTACCGCCAGTAAAGGGCCTGTGGTCAGGTCTCTTAGATGGCATGGACGGAAGAGTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98859.p1 GENE.S_Transcript_98859~~S_Transcript_98859.p1 ORF type:complete len:325 (+),score=77.47,DUF3493|PF11998.4|3.4e-27 S_Transcript_98859:173-1147(+)
MASVVQSAHFLRWTRPSLCPENGSSRICPQFVFGGHIWVPTLRHGARRTRSSPTITCSAANKPSTSSDVSSTAKIRSEVLSPFRSLRMFFYLAFMASGGLGGLIASTQLIGALANPSRADQVPEILKGLGIDLGAVSVFAFLYSRDNKAKNAQIARLVREETLSNLKVRIDEKKTIPVSSLRGIARLVILAGPGSFIAESFKLSEPFTEGLLERGVLVVPFATDGELPEFEFGNNQDMTATSKKRSRLWQLVPFNVSEWSKWLDEQKKLANVSSDSPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPPVKGLWSGLLDGMDGRVL*

Click here to download the sequence:
Link to NCBI Protein BLAST