Transcript Information: S_Transcript_98882.p1


Annotated TAIR IDAT2G16390.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)DRD1, CHR35, DMS1
Annotation TypeOrtholog
Chromosome Positionchr2:7097638-7101182 | Forward length=888
E-Value6e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8476998229769
Replicate 25.2930907682827
Replicate 35.0035225697661
Condition 2: 8 Hour
Replicate 16.1202913914642
Replicate 25.944089829165
Replicate 37.145110351894
Condition 3: 24 Hour
Replicate 15.5836697711384
Replicate 25.08157210232
Replicate 35.7117185760465


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98882.p1 GENE.S_Transcript_98882~~S_Transcript_98882.p1 ORF type:complete len:892 (+),score=209.93,SNF2_N|PF00176.19|2.5e-19,Helicase_C|PF00271.27|1.1e+03,Helicase_C|PF00271.27|1.5e-09,ResIII|PF04851.11|2e-07 S_Transcript_98882:203-2878(+)
ATGAATATGAACCGGCCAGCTGGAGAGGTGTTTGCTAGTAATCCACCTTCACAGTCGTTGTACAACAACACCAACCTTCATGATCATTATACACCAAGGAGTAAGAGGATGAAGTTGTCTGATGAAGGAGGAGAAAGTAGCAGAATAGTTGATTATTCTGATCATTATGCCATTCCAGATCTACTAGCAAGCATCAGCTCGGGTAAGTATGGAAGTGTGACAAAAGACATTCAAGCATTGGTTGCAAGGAAGATGCAGTTGATGAACTCATTAATAACAATGCATCCCGACCTTGAGGACAAAAATCCGGGGACAAGATACAACTTGGGTGGAGAAGTATCAAACCCAGTGAATTCAGATGTTGTTGATTTGGATAATGTTGAGGCTACAGCTATTGTCCCATCTATGGGTCCTGTGGTGATAATTGATTCAGATGATGAAGAGAGTGAAGACAGAAAGCCGTTCCCTCACTTTCAAGAGATCGCCATTCCTAGGCCTCCTGTTGGATTGTTTATGGAGAATGCCTTTCCTAGGACTCCTGTTGGACTCCTTACCGAGAACTTTCTGGTTGATAATGACAAGCGCGCGAATGCTGTCAAGGAAGAAGATAGAAGAGGTGACAAGGTTAAGGACAAAGGTCTATACCTTGGTGTTGATGATGAGTTAAATGAGGAAAATGATAGGCACGCTGTTGAAGATGACAGGCTGGCGGACATATGGAAGGAGATGAATGTTGCCTTAGAATTTTCCAAGGATGTATCAGCTGACCACTCATCTGACGATCACACAACAGAAGATGATGAGGGATGTGACCATTCATTCGTCCTTAAAGATGATCTTGGTTATGTCTGCCGTGTTTGTGGAGTCATTCAAAGGGCTATTGAGACTATATTTGACTTCCAGTACATTAAGGCTGCTCGAATAAGAAATTATAGATCTGATTCACGGTCTGGACGAGATAATGAAGACGCCGGGCATCTGGATGGGGTCAAGCTGCCTGGCCATGATTTGGCTGTGACTGAAATTAGCCCTCATCCAAGGCACAAGAAGCAAATGAAGCCCCATCAACTAGAGGGTTTCAACTTTTTATTAAGCAACTTAATAACTGAGCATCCTGGTGGCTGCATCTTGGCCCATGCTCCTGGGTCAGGAAAGACTTTCATGATTATCAGTTTTATGCAGAGTTTTTTGGCGAAGTATCCAGATGCTAGGCCCTTAGTTGTGCTACCAAAGGGCATTCTTCCTACATGGAAAAAAGAGTTTCAGAGATGGCAAGTGGAGGACATTCCTTTGCTTGATTTTTACTCCCAGAAAGCTGATGGCAGGATTCAGCAAATTGAAATCTTGAAACAGTGGGTATCCCTCAGAAGCATACTGTTTTTAGGCTATAAGCAGTTCGCTTCTATTGTCACCGGCGCAAGCACGTGCAAGATCACTGCCAACTGTCAAGAGATATTGTTGAAGTGCCCTACTATTCTTATTTTGGATGAAGGACACACTCCAAGAAATGAGAATACTGATGTGCTGCACTCTCTGGCAAAGGTTCAGACACCGAGGAAGGTTGTCTTATCAGGTACGTTGTACCAAAACCATGTCAAGGAGGTGTTCAATATTTTAAATCTTGTCCGCCCAAAATTTTTGAAGCTGGATATGTCAAGAAGCATAAAGAAGAGGATCATGAGCCGGGTGCAGTTTGTTGGGTATAAGAAGCACTTGAAAGGGAATGCGGAGAGCAACTTCTTTGACCTTGTCGAACACACCCTCCAGCAAGATGAGGATTTTAAAAGAAAGGAGGCAGTGATAAAGGATCTGAGGGAGATGACTAGCAAGGTTCTCCATTACTACAGGGGAGATTTCTTGGATGATCTCCCTGGACTTGTGGACTTCACTGTTCTTCTTGGTTTGAGCCATCAACAGAAATGTGAAGTGGGCAGGATGAAGAAGACAGCAAGAGGTAGTAAATTCAGACAGAGTTCTTTGGGTTGTGCTGTGTACACACACCCAGTGCTCAAACAGTATGAAAAAATCCACATGCTTGGTGATTCAAAGGTTGATGAGCTGGTTGAAAAGATAAACATCAGAGAAGGAGTGAAGGCTAAGTTCTTCATCAACTTGCTGCACTTGTGCGAAGGTGCTGATGAGAAACTATTAGTTTTCAGCCAGTACCTGGATCCATTGAAGTTTTTGGAACGCCTAGCTGTCTGGAAGAAGGGCTGGTCTGTGGGAAAGGAGTTGTTTATGATAATTGGCGATTCAACCTCTGAACAAAGAGAGTTCGCCATGGATCGTTTCAACAACTCCCCTGATGCAAAGGTCTTTTTTGGATCAATCAAGGCCTGTGGAGAAGGAATTTCTCTAGTCGGTGCCTCTCGTATATTGATCTTGGATGTGCACCTGAATCCTTCTGTGTCACGCCAAGCAATCGGGCGTGCATTTCGACCTGGCCAGCTGAAGAAAGTTTACACCTACAGGCTGGTTGCAGCAGAATCACCTGAAGAGGAGGACCATCTTACATGTTTCAAGAAGGAACAAATTGCAAAAAGGTGGTTTGAGTGGAATGAATACTGTGGAAGCCAGGACTTTCAGATGGAGCCAGTTGATCTTAGAGAGAGTGGCGATTTATTCCTGGAGAGTCCGGAGCTGTCTGAAGATGTGAAGGCCTTGTACAGAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98882.p1 GENE.S_Transcript_98882~~S_Transcript_98882.p1 ORF type:complete len:892 (+),score=209.93,SNF2_N|PF00176.19|2.5e-19,Helicase_C|PF00271.27|1.1e+03,Helicase_C|PF00271.27|1.5e-09,ResIII|PF04851.11|2e-07 S_Transcript_98882:203-2878(+)
MNMNRPAGEVFASNPPSQSLYNNTNLHDHYTPRSKRMKLSDEGGESSRIVDYSDHYAIPDLLASISSGKYGSVTKDIQALVARKMQLMNSLITMHPDLEDKNPGTRYNLGGEVSNPVNSDVVDLDNVEATAIVPSMGPVVIIDSDDEESEDRKPFPHFQEIAIPRPPVGLFMENAFPRTPVGLLTENFLVDNDKRANAVKEEDRRGDKVKDKGLYLGVDDELNEENDRHAVEDDRLADIWKEMNVALEFSKDVSADHSSDDHTTEDDEGCDHSFVLKDDLGYVCRVCGVIQRAIETIFDFQYIKAARIRNYRSDSRSGRDNEDAGHLDGVKLPGHDLAVTEISPHPRHKKQMKPHQLEGFNFLLSNLITEHPGGCILAHAPGSGKTFMIISFMQSFLAKYPDARPLVVLPKGILPTWKKEFQRWQVEDIPLLDFYSQKADGRIQQIEILKQWVSLRSILFLGYKQFASIVTGASTCKITANCQEILLKCPTILILDEGHTPRNENTDVLHSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDMSRSIKKRIMSRVQFVGYKKHLKGNAESNFFDLVEHTLQQDEDFKRKEAVIKDLREMTSKVLHYYRGDFLDDLPGLVDFTVLLGLSHQQKCEVGRMKKTARGSKFRQSSLGCAVYTHPVLKQYEKIHMLGDSKVDELVEKINIREGVKAKFFINLLHLCEGADEKLLVFSQYLDPLKFLERLAVWKKGWSVGKELFMIIGDSTSEQREFAMDRFNNSPDAKVFFGSIKACGEGISLVGASRILILDVHLNPSVSRQAIGRAFRPGQLKKVYTYRLVAAESPEEEDHLTCFKKEQIAKRWFEWNEYCGSQDFQMEPVDLRESGDLFLESPELSEDVKALYRR*

Click here to download the sequence:
Link to NCBI Protein BLAST