Transcript Information: S_Transcript_98887.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.12674394173425


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_98887.p1 GENE.S_Transcript_98887~~S_Transcript_98887.p1 ORF type:internal len:199 (-),score=33.45,rve|PF00665.22|3e-19,gag_pre-integrs|PF13976.2|3.1e-17 S_Transcript_98887:2-595(-)
GGTGATCTGTACACTTTGGAGGCTGAGGCCATTACTGCTGTTGGTGCTAATAAAGCTTCTGCTTCTGCTTATATTGTTGAATCTGTTGATATTTGGCATGCTAGATTAGGACACGTGAATTTTGGTTCATTGAAAAGGTTAAGAAAAATGAACCTACTTCCTAATCTGACTTCGGATAGTAGTAAAAAGTGTGAAATCTGTGTTGAGGCCAAGTTTGCTAAGAAGTCTTTTAATTCTGTGACTGAGAGGAAAACAGAGTTGCTTGAACTTATCCATACGGACTTAGCTGACTTTAGAAACACAGAGAATAGAGGTTGTAAACGATATTATATCACCTTTGTTGATGACTATTCGAGGTATTGTCGAGTATACTTGTTGAGGACAAAAGATGAGGCTGAAAATATGTTCTTAAAGTATAAGGCAGAAGTAGAAAACCAATTGGATAGGAAAATCAAAAGACTTAGGTCTGACCGGGGTGGTGAATATGGAACTACGTTCCTTAAGGAGTTGTGTGAAAAGGAGGGCATTATACATGAACTCTCCGCTTCTAGAACACCCGAACAGAATGGTATAGCTGAAAGAAAGAATAGAACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_98887.p1 GENE.S_Transcript_98887~~S_Transcript_98887.p1 ORF type:internal len:199 (-),score=33.45,rve|PF00665.22|3e-19,gag_pre-integrs|PF13976.2|3.1e-17 S_Transcript_98887:2-595(-)
GDLYTLEAEAITAVGANKASASAYIVESVDIWHARLGHVNFGSLKRLRKMNLLPNLTSDSSKKCEICVEAKFAKKSFNSVTERKTELLELIHTDLADFRNTENRGCKRYYITFVDDYSRYCRVYLLRTKDEAENMFLKYKAEVENQLDRKIKRLRSDRGGEYGTTFLKELCEKEGIIHELSASRTPEQNGIAERKNRT

Click here to download the sequence:
Link to NCBI Protein BLAST