Transcript Information: S_Transcript_99040.p1


Annotated TAIR IDAT5G10540.1
Annotated Gene NameZincin-like metalloproteases family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3328119-3332462 | Forward length=701
E-Value2.8E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5775751091696
Replicate 24.8881629558566
Replicate 36.073954997593
Condition 2: 8 Hour
Replicate 15.3632718162849
Replicate 25.7604161168158
Replicate 36.7649097189462
Condition 3: 24 Hour
Replicate 16.6711919641934
Replicate 26.2427265419879
Replicate 35.1350270046344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99040.p1 GENE.S_Transcript_99040~~S_Transcript_99040.p1 ORF type:3prime_partial len:167 (+),score=30.66 S_Transcript_99040:408-905(+)
ATGAGAAGGCTGCCCAAGAAGAATGCTAGGCTGGTGGGCAGTCTTCTTATACTGCTCAACCTTTTAATGGCGACTTCCACTTCCATTTCTCTCTCTCGCTCTCTTCTCAAACACCACCACCACCACCACCACCACTCTCCTCTCTCTCTCCTCCGTTGTTTACCCCCTCGTTCCCATTCCCAATTTCCCCCCAAACATTTCCGTAAATCCCTTCCTTGCCCTCTCTGGTCTTCTTCCTTCTCTTTCTGCCTCGATCACACTCTCTCTCACAAACGCACCACCTCCCTTTCTCTCTCCTCCTCCTCCTCCTCTTTCTCCACCTCCACTCCAATGGCGGCTCCCTCTTCAACCTCCGTCAATGTCGAAACCCACAATCCTTTGTTGAAGGTCTTTGATTTCCCGCCCTTCGATTCCGTCAAACCCGAGCATGTTCGTCCTGGTATTCGCGCCTTGTTGCAATCCCTGGAGAGAGTTTTGGATGAATTGGAGATGACGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99040.p1 GENE.S_Transcript_99040~~S_Transcript_99040.p1 ORF type:3prime_partial len:167 (+),score=30.66 S_Transcript_99040:408-905(+)
MRRLPKKNARLVGSLLILLNLLMATSTSISLSRSLLKHHHHHHHHSPLSLLRCLPPRSHSQFPPKHFRKSLPCPLWSSSFSFCLDHTLSHKRTTSLSLSSSSSSFSTSTPMAAPSSTSVNVETHNPLLKVFDFPPFDSVKPEHVRPGIRALLQSLERVLDELEMTV

Click here to download the sequence:
Link to NCBI Protein BLAST