Transcript Information: S_Transcript_99048.p1


Annotated TAIR IDAT1G53210.1
Annotated Gene Namesodium/calcium exchanger family protein / calcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19844790-19847533 | Forward length=585
E-Value3.9E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.344050120334
Replicate 238.965733170127
Replicate 339.376728855913
Condition 2: 8 Hour
Replicate 173.907955554741
Replicate 270.317967801076
Replicate 374.519515619028
Condition 3: 24 Hour
Replicate 129.684377969073
Replicate 229.837639030957
Replicate 329.442668771295


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99048.p1 GENE.S_Transcript_99048~~S_Transcript_99048.p1 ORF type:5prime_partial len:496 (+),score=118.18,Na_Ca_ex|PF01699.20|1.8e-07,Na_Ca_ex|PF01699.20|1e-14,EF-hand_7|PF13499.2|4.4e-07,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|0.13,EF-hand_6|PF13405.2|0.27,EF-hand_6|PF13405.2|0.16 S_Transcript_99048:3-1490(+)
TTGATACTTGTTTATGGGTATTTGATGTATTTTGCTGCTACACTTTTGTCTGATGGGAGTGAGCTTTTGTTGGAGATTTTGGGTCCTGGTGTTATTGGTGGCCTCTTTCTTCCTGTGCTTGGTGCTTTGCCTGATGCCATGCTCATCCTTGTATCTGGTCTTTCTGGAAGTGTTGCAACTGCTCAAGACCAAGTTTCAGTTGGGATGGGATTGCTTGCTGGGTCTACTGTGATGCTTCTTACAGTAATATGGGGGACTTGCATTATTGTTGGAAAGTGTGATCTGGAGGACTCACTTGCAGTTGATGAGAAAGATACTAAAGGGTTTAATTTGATTGGTTCTGGTGTGACTACTGATATATGGACTAGTTACTCTGCGAGGATCATGGCTATTTCTGTATTTCCCTTCCTTGTGGTGCAGTTACTACAATTGCTTAAGTCAAATTCTGGAAGACGCTTGGCAGTATTGATTGCCCTCATAATCTCTGTGGTCATGCTGATTAGCTATTGTCTTTATCAGATTCTCCAACCAAAAATCCAAGAGAGGCGCATTGATTATGTGAGAAGTAAGCGTATTTTGACAGGATTTCTTAGACATTTGAAAAAGCATGCTCTTGGAAGACTCTGCCTTTCGGATGGCAGTCCTAACTATGATGTCATTGAAAAGCTGTTTGTAGCAATTGATCAGGATAATAGCAACAGTCTCTCAAAAGGGGAACTTAGAGCATTTGTTGTTGGAATGGAACTTGAAGGGATGACTGTGGGTGAGGAGGATATTGCTGACAAAATAATGAGAACATTTGATACTGACACTCCTGATGGTAAAATTGACTACACTGAGTTTAAAAAAGGAATTGTAAAGCTGCTTGACCGTGTAAGAGGCAACAATGTTCATGTGGACACTAGTAAACATATAGAGGCATATGATGAGGAAGCGAAAGTCGAGCATCTTCTACTTGGTGATTCAAGTGATGAGAAGAGTGGTGGTGAGGAAGTTGAAAATACCAAGAAAATGACCATCAAGGCAATATTGTACTTGGTGCTTGGGACTCTTATAGCTGCTGTTTTTGCAGATCCACTAGTAGATGCTGTTGATAATTTCTCTGATGCAACCAGTATCCCTTCGTTCTTTATCTCATTCATTGCCCTACCATTAGCAACCAACTCCAGTGAAGCAGTATCCGCTATAATTTTTGCCAGCAGAAAGAAGAAGAAATCTGCTTCCTTGACGTTTTCTGAGATATACGGAGCGGTAACGATGAACAATGTGCTATGTCTTTCGGTGTTTTTGGCCCTGGTTTATGTAAGAGGATTGACCTGGGACTTCTCCTCTGAAGTGCTCGTCATCTTCCTTGTATGCATCATAATGGGTGCTCTCGGCAGCTTCAGAACGACATTCTCCCTCTGGACAGCTGCTGTGGCTTTCCTTCTGTACCCATTGTCACTCGTGCTTGTGTATGTGCTTGACTATATTTTTGGATGGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99048.p1 GENE.S_Transcript_99048~~S_Transcript_99048.p1 ORF type:5prime_partial len:496 (+),score=118.18,Na_Ca_ex|PF01699.20|1.8e-07,Na_Ca_ex|PF01699.20|1e-14,EF-hand_7|PF13499.2|4.4e-07,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|0.13,EF-hand_6|PF13405.2|0.27,EF-hand_6|PF13405.2|0.16 S_Transcript_99048:3-1490(+)
LILVYGYLMYFAATLLSDGSELLLEILGPGVIGGLFLPVLGALPDAMLILVSGLSGSVATAQDQVSVGMGLLAGSTVMLLTVIWGTCIIVGKCDLEDSLAVDEKDTKGFNLIGSGVTTDIWTSYSARIMAISVFPFLVVQLLQLLKSNSGRRLAVLIALIISVVMLISYCLYQILQPKIQERRIDYVRSKRILTGFLRHLKKHALGRLCLSDGSPNYDVIEKLFVAIDQDNSNSLSKGELRAFVVGMELEGMTVGEEDIADKIMRTFDTDTPDGKIDYTEFKKGIVKLLDRVRGNNVHVDTSKHIEAYDEEAKVEHLLLGDSSDEKSGGEEVENTKKMTIKAILYLVLGTLIAAVFADPLVDAVDNFSDATSIPSFFISFIALPLATNSSEAVSAIIFASRKKKKSASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIFLVCIIMGALGSFRTTFSLWTAAVAFLLYPLSLVLVYVLDYIFGWS*

Click here to download the sequence:
Link to NCBI Protein BLAST