Transcript Information: S_Transcript_99089.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value2E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51475824439421
Replicate 21.0668660327618
Replicate 31.8549753894531
Condition 2: 8 Hour
Replicate 11.3611951266255
Replicate 21.9472595527809
Replicate 31.5255055345925
Condition 3: 24 Hour
Replicate 11.8168858609198
Replicate 20.70139455555427
Replicate 30.87813694253789


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99089.p1 GENE.S_Transcript_99089~~S_Transcript_99089.p1 ORF type:complete len:517 (+),score=109.42,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|14,PPR_2|PF13041.2|8.1e-07,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|5.5e-09,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|9.3,PPR|PF01535.16|1e+02,PPR|PF01535.16|3.4,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.0048,PPR|PF01535.16|81,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0092,PPR|PF01535.16|1.9e-09,PPR|PF01535.16|1.4,PPR|PF01535.16|19,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|92,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|7.6,PPR_1|PF12854.3|28 S_Transcript_99089:1091-2641(+)
ATGGAAGCCTGTAGGTTGTTTTTAGCCTTGTTTAGAGGGTGTTCGGATCGGAATGCTTTTGTTAGTGATTATACTGTTGTCAGTGTGCTCAATGCTTGTGCTCATTTGGGGTATTATAGGTTGGGTGAGTCTGTCCATGGTTATGCAATTAAGGCTGGTTTCGGGTCAGATGTATTTGTTGGTAGCTCCCTTGTGGATATGTATTCTAAATGTGAAGAGTTAGATAGTGCTAGGTTGGTCTTTGATCAGTTGGGGAAGTGGGATATTGTGGTGTGGAATACTATGATTATTGAATATGCTCAAAATGGTTATGAAGATGAAGCTGTTGAATTATTCCTTCAGATGGAACATGAAGGGCTTTCTCCTAATTATACAACCTTTTTGGCAGTCATAGATGCATCATCTGTGATGCCAGTTGACACACTTGGTAAATCTTTTCATGCTAAAGCATTGAAGTTTGGATTTCTATCAGATGTTTACTTGGGAACTGCCCTAGTTGACATGTACTCAAAGTTTCTGGATATGGCTAATGCTGAAAAGACGTTCAGTGAGATGTACGAAAAGAATGCAGTATCATACAATGCACTTATCACAGGTTATGGACTGACTGGTGAGCATGAAATGGCAGTGGGAACTTACATGTCACTGAGATTTCAGGGACTGAAACCTGGCGCTTGCACTTTTGTTGGCCTTTTCACTTCTTGTGCCTCATCTTGTGCCTCTGTTGAAGGGGCACAAGTGCATTCTCATGCAATTATGCTTGGTGTGGACTTGGATGTTTCAATGTCAATACTGAATTTTTATTCAAAATGTGGGTTCATTGATGGTGCAGTGAAAGCACTTGAGACTGCACCGGTGAATAATGTTGCTTTGTGGACTGCCATCATTTCGGGACTCGTCCAAAACAGTGAAGCTCAAAAAGCTCTTGAGATATTCTGTGAAATGCACAAGCTTTCAGAAAAAGCAGATACATTCTCCTACTCTAGTGTCATCAAGGCAGTGGCTAGCCTGGCATCTGTTGCAAAAGGAAGACAGTTGCATGGCCTTGTGATTAAAATGGGCCTGGATCACAATATATTTGTGGGTAGTGCACTGATTGACATGTATTCCAAATGTGGGGTGGTGGAAGATGCACAAACATTGTTCAGTGAGCTGCCTGAGAAAAATGTAGTCTCATGGAATTCGATGGTTATGGGTTATGCTCAAAATGGTTTCCCACAAGAAGCATTGTTCCTATTCCAAGAAATGGAGAATAATGGAGTCTTGCCTACACCTGTAACCTTTGTCGGGATTCTTCTTGCATGTTGTCACGCAGGTTTAGTTAAAGAAGGCAGGCACTATTATCACTTGATGGAGTCTCACTATGGGATTTCACCCTCAATAGAGCACTGCACCTGTATGGTAAACCTTCTTGGTCGTTGTGGTTATGTTGATGAGACAGAAGCATTCCTTCTTAGTTCACTTTTTAAAGGTGAATATGAAATTTGGAGATCCCTTCTTAGTTTGAGGAAGAAGTTTAACCTGTATGGTGTAGGCAGGAAGGGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99089.p1 GENE.S_Transcript_99089~~S_Transcript_99089.p1 ORF type:complete len:517 (+),score=109.42,PPR_2|PF13041.2|2.2e+03,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|14,PPR_2|PF13041.2|8.1e-07,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|5.5e-09,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|5.9e-11,PPR_2|PF13041.2|9.3,PPR|PF01535.16|1e+02,PPR|PF01535.16|3.4,PPR|PF01535.16|9.3e-07,PPR|PF01535.16|1.3,PPR|PF01535.16|0.0048,PPR|PF01535.16|81,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.0092,PPR|PF01535.16|1.9e-09,PPR|PF01535.16|1.4,PPR|PF01535.16|19,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|45,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.0045,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|4.7e+02,PPR_1|PF12854.3|92,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|6.3,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|7.6,PPR_1|PF12854.3|28 S_Transcript_99089:1091-2641(+)
MEACRLFLALFRGCSDRNAFVSDYTVVSVLNACAHLGYYRLGESVHGYAIKAGFGSDVFVGSSLVDMYSKCEELDSARLVFDQLGKWDIVVWNTMIIEYAQNGYEDEAVELFLQMEHEGLSPNYTTFLAVIDASSVMPVDTLGKSFHAKALKFGFLSDVYLGTALVDMYSKFLDMANAEKTFSEMYEKNAVSYNALITGYGLTGEHEMAVGTYMSLRFQGLKPGACTFVGLFTSCASSCASVEGAQVHSHAIMLGVDLDVSMSILNFYSKCGFIDGAVKALETAPVNNVALWTAIISGLVQNSEAQKALEIFCEMHKLSEKADTFSYSSVIKAVASLASVAKGRQLHGLVIKMGLDHNIFVGSALIDMYSKCGVVEDAQTLFSELPEKNVVSWNSMVMGYAQNGFPQEALFLFQEMENNGVLPTPVTFVGILLACCHAGLVKEGRHYYHLMESHYGISPSIEHCTCMVNLLGRCGYVDETEAFLLSSLFKGEYEIWRSLLSLRKKFNLYGVGRKGA*

Click here to download the sequence:
Link to NCBI Protein BLAST