Transcript Information: S_Transcript_99091.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value2E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 23.5871318686169
Replicate 32.9985567408651
Condition 2: 8 Hour
Replicate 13.3553935813671
Replicate 23.5591577381383
Replicate 33.7638122519285
Condition 3: 24 Hour
Replicate 13.589893440762
Replicate 23.3678740978838
Replicate 32.6015745103179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99091.p1 GENE.S_Transcript_99091~~S_Transcript_99091.p1 ORF type:complete len:572 (+),score=116.05,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|34,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|14,PPR_2|PF13041.2|6.9e-08,PPR_2|PF13041.2|5.4e+03,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.7e-11,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|8.9e+03,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|3.9,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0018,PPR|PF01535.16|91,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.01,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|1.5,PPR|PF01535.16|0.95,PPR|PF01535.16|4.6e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|51,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|1.4e+04,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|7.1,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|0.85,PPR_1|PF12854.3|1.4e+04 S_Transcript_99091:197-1912(+)
ATGGAAGCCTGGAGATTGTTTTTAGCCTTGTTTAGAGGGTGTTCGGATCGGAATGCTTTTGTTAGTGATTATACTGTTGTCAGTGTGCTCAATGCTTGTGCTCATTTGGGGTATTATAGGTTGGGTGAGTCTGTCCATGGTTATGCAATTAAGGCTGGTTTCGGGTCAGATGTATTTGTTGGTAGCTCCCTTGTGGATATGTATTCTAAATGTGAAGAGTTAGATAGTGCTAGGTTGGTCTTTGATCAGTTGGGGAAGTGGGATATTGTGGTGTGGAATACTATGATTATTGAATATGCTCAAAATGGTTATGAAGATGAAGCTGTTGAATTATTCCTTCAGATGGAACATGAAGGGCTTTCTCCTAATTATACAACCTTTTTGGCAGTCATAGATGCATCATCTGTGATGCCAGTTGACACACTTGGTAAATCTTTTCATGCTAAAGCATTGAAGTTTGGATTTCTATCAGATGTTTACTTGGGAACTGCCCTAGTTGACATGTACTCAAAGTTTCTGGATATGGCTAATGCTGAAAAGACATTCAGTGAGATGTACAAAAAGAATGCGGTATCATACAATGCACTCATCACAGGTTATGGGCTGACTGGGGAGCATGAAATGGCACTGGGAACTTTTATGTCACTGATATTTCAGGGAATGAAACCTGACGCTTGCACTTTTGTTGGCCTTTTCACTTCTTGTGCCTCATCTTGTGCCTCTGTTGAAGGGGCACAAGTGCATTCTCATGCAATTATGCTTGGTGTGGACTTGGATGTTTCAATGTCAATACTGAATTTTTATTCAAAATGTGGGTTCATTGATGGTGCAGTGAAAGCACTTGAGACTGCACCGGTGAATGATGTTGTTTCGTGGACTGCCATCATTTCAGGACTCGTCCAAAACAATGAAGCTCAAAAAGCTCTTGAGATATTCTGTGAAATGCACAAGCTTTCAGAAAAAGCAGATACATTCTCCTACTCTAGTGTCATCAAGGCAGTGGCTAGCCTGGCATCTGTTGCAAAAGGAAGACAGTTGCATGGCCTTGTGATTAAAATGGGCCTGGATCACAATATATTTGTGGGTAGTGCACTGATTGACATGTATTCCAAATGTGGGGTGGTGGAAGATGCACAAACATTGTTCAGTGAGCTGCCTGAGAAAAATGTAGTCTCATGGAATTCGATGGTTATGGGTTATGCTCAAAATGGTTTCCCACAAGAAGCATTGTTCCTATTCCAAGAAATGGAGAATAATGGAGTCTTGCCTACACCTGTAACCTTTGTCGGGATTCTTCTTGCATGTTGTCACGCAGGTTTAGTTAAAGAAGGCAGGCACTATTATCACTTGATGGAGTCTCACTATGGGATTTCACCCTCAATAGAGCACTGCACCTGTATGGTAAACCTTCTTGGTCGTTGTGGTTATGTCGATGAGGCAGAAGTATTCCTTCTTAGTTCACCTTTTAAAGGTGAATATGAAATTTGGAGATCCCTTCTCACTACTTGTGAAGCTTACAAAGATTTTGATGTTGCTGCTCGAGTTGCAGAGATTTGCTTACACTTAAACCCCGATGACCCCCCCACTTATACCATTCTATCCAACATATATGCAACTAAACAACTGTGGTCAGAGGTTGGAAGATCAAGGGATCTCGTGAAGACGGCAGGTGTTGTAAAGGAACCTGGGTGTAGCTGGATTGAAGCTAAAGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99091.p1 GENE.S_Transcript_99091~~S_Transcript_99091.p1 ORF type:complete len:572 (+),score=116.05,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|34,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|14,PPR_2|PF13041.2|6.9e-08,PPR_2|PF13041.2|5.4e+03,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|6.7e-11,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|8.9e+03,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|3.9,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0018,PPR|PF01535.16|91,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.01,PPR|PF01535.16|2.1e-09,PPR|PF01535.16|1.5,PPR|PF01535.16|0.95,PPR|PF01535.16|4.6e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|51,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.73,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|1.4e+04,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|7.1,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|0.85,PPR_1|PF12854.3|1.4e+04 S_Transcript_99091:197-1912(+)
MEAWRLFLALFRGCSDRNAFVSDYTVVSVLNACAHLGYYRLGESVHGYAIKAGFGSDVFVGSSLVDMYSKCEELDSARLVFDQLGKWDIVVWNTMIIEYAQNGYEDEAVELFLQMEHEGLSPNYTTFLAVIDASSVMPVDTLGKSFHAKALKFGFLSDVYLGTALVDMYSKFLDMANAEKTFSEMYKKNAVSYNALITGYGLTGEHEMALGTFMSLIFQGMKPDACTFVGLFTSCASSCASVEGAQVHSHAIMLGVDLDVSMSILNFYSKCGFIDGAVKALETAPVNDVVSWTAIISGLVQNNEAQKALEIFCEMHKLSEKADTFSYSSVIKAVASLASVAKGRQLHGLVIKMGLDHNIFVGSALIDMYSKCGVVEDAQTLFSELPEKNVVSWNSMVMGYAQNGFPQEALFLFQEMENNGVLPTPVTFVGILLACCHAGLVKEGRHYYHLMESHYGISPSIEHCTCMVNLLGRCGYVDEAEVFLLSSPFKGEYEIWRSLLTTCEAYKDFDVAARVAEICLHLNPDDPPTYTILSNIYATKQLWSEVGRSRDLVKTAGVVKEPGCSWIEAKG*

Click here to download the sequence:
Link to NCBI Protein BLAST