Transcript Information: S_Transcript_99095.p2


Annotated TAIR IDAT3G22690.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8021347-8024534 | Reverse length=938
E-Value7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9425548346847
Replicate 22.5766761527025
Replicate 31.8846591618278
Condition 2: 8 Hour
Replicate 12.0235771833776
Replicate 22.1228761482952
Replicate 31.4003111565316
Condition 3: 24 Hour
Replicate 11.2756136344872
Replicate 21.9851513789501
Replicate 32.7615377085893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99095.p2 GENE.S_Transcript_99095~~S_Transcript_99095.p2 ORF type:complete len:137 (+),score=-0.99,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|1.5e+02 S_Transcript_99095:677-1087(+)
ATGAGTGTGCCAAGGAAGAGAATTTCTATAATAATAATGGCCAGAATAGTGGTCAAATGGACATCAAAGATCCAATCTTTCTTACACAAAGGGTTGATCAATCAAGCCCTGTTATATTTCCTACGCATGCAAAGAGCAGGGATTGAACCCACTGAAACCACATTCTCGACCACCTTAACTGCTTGTAGTCAATCACCTCACAAATCATTCGGTTTAAGCATGCATAGTTTAATCCTCAAAAAAGGGTACTCTAATCAGCTCTTTGTTTCAAGTGGGTTAATCTCTATGTACAGTAAATTCAGTATTGTCGGCGATGCCCGCCGAATGTTTGATGAAACGCCTGAACGAGATGGGTTCGTTTGGAATTCTACGATTTCAAGTGTAGCATGGAAGCCTGTAGGTTGTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99095.p2 GENE.S_Transcript_99095~~S_Transcript_99095.p2 ORF type:complete len:137 (+),score=-0.99,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|1.5e+02 S_Transcript_99095:677-1087(+)
MSVPRKRISIIIMARIVVKWTSKIQSFLHKGLINQALLYFLRMQRAGIEPTETTFSTTLTACSQSPHKSFGLSMHSLILKKGYSNQLFVSSGLISMYSKFSIVGDARRMFDETPERDGFVWNSTISSVAWKPVGCF*

Click here to download the sequence:
Link to NCBI Protein BLAST