Transcript Information: S_Transcript_99230.p1


Annotated TAIR IDAT3G49240.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1796
Annotation TypeHomolog
Chromosome Positionchr3:18256086-18257975 | Forward length=629
E-Value8E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2275538140533
Replicate 25.2530451327416
Replicate 34.1715712570049
Condition 2: 8 Hour
Replicate 18.1239582160507
Replicate 25.859293691357
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 13.1206976415135
Replicate 23.1027837277142
Replicate 32.552230683851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99230.p1 GENE.S_Transcript_99230~~S_Transcript_99230.p1 ORF type:5prime_partial len:168 (-),score=69.77,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|0.008 S_Transcript_99230:35-538(-)
GGGAAGATTGATGAGGCAAAGTCATTCTTTGACTTGATGGTGAAGAAGCTCAAGTTCAACTCGGCTAGTTATGAATTTATGTTCAAGGCCTTGTGTGATGTTGGGAAGGTGGATGATGTGCTTCAAATTGTCAGTGATATGTTGGATGAGGGAAGTGTTGACCTTAATGAAGATATGCACCGAATGGTCAAGGATGGGCTGAGAAGTCAAGGCCGAGAGGAGGAGGAATTGGACCGACTTATTGAGCAGAAAGAGAAAGAGAAAGAAGAAGCTAAGAGAAGGGAGGCTGAAGAAGCTGAGAGAGCCAAAGCCAGTGCAAGAGCTGCCGTTGCATCTTTGATTCCGTCTAAGTTGTTTGGGAACAAGGAAGATGGCAGGGAATCTACGGCTTTACCTGGAAGTACTGATACAGTATCCTCTAATGAAGCTCCGGCCAGTGGAGAAGCCAGCTCAGCAGCAGAATCAGATCTCAAGAGTGCTGGTCCTCCACATGTGACAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99230.p1 GENE.S_Transcript_99230~~S_Transcript_99230.p1 ORF type:5prime_partial len:168 (-),score=69.77,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|0.008 S_Transcript_99230:35-538(-)
GKIDEAKSFFDLMVKKLKFNSASYEFMFKALCDVGKVDDVLQIVSDMLDEGSVDLNEDMHRMVKDGLRSQGREEEELDRLIEQKEKEKEEAKRREAEEAERAKASARAAVASLIPSKLFGNKEDGRESTALPGSTDTVSSNEAPASGEASSAAESDLKSAGPPHVTA*

Click here to download the sequence:
Link to NCBI Protein BLAST