Transcript Information: S_Transcript_99233.p1


Annotated TAIR IDAT3G49240.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1796
Annotation TypeHomolog
Chromosome Positionchr3:18256086-18257975 | Forward length=629
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 21.3371387610615
Replicate 31.9560477664425
Condition 2: 8 Hour
Replicate 13.5542317195222
Replicate 24.9150273526672
Replicate 36.2978640651081
Condition 3: 24 Hour
Replicate 12.1513900407403
Replicate 21.3735643379605
Replicate 32.1018370337597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99233.p1 GENE.S_Transcript_99233~~S_Transcript_99233.p1 ORF type:internal len:132 (-),score=33.93,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|2.7e-13,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|7.4e-06,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|0.033,PPR_3|PF13812.2|1.9e-07,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|3.2e+02,TPR_7|PF13176.2|9.1e+03,TPR_7|PF13176.2|0.86,TPR_7|PF13176.2|0.05,TPR_2|PF07719.13|4.6e+03,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.26,TPR_12|PF13424.2|0.0074,TPR_12|PF13424.2|0.1 S_Transcript_99233:1-393(-)
GGGAAAGGTTTTGGAAGGGATATTGTAATAAAGGAGGTGTTTGAAGAGGCAGTAGCGGTAGGGAAGAAGGAGGATTCGAAGGTTAAGATGAATGATGTGGCGTATAATTTGGTGCTGGATGCTTTTTGTAAGCATGGCAACTTTGACGAGGCGTTGAAGCTATTTGATAGGATGAAGGAGTTGCATAATCCGCCTTGGAAGTTGACTGTTAATTTGGGTAGTTATAATGTGATGGCGGATGGGTATTGTGCTCAAGGGAGGTTTCAGGAAGCGGTTGAGGTGTTCATGAGTATGGGTGAGAAAAATTGTAGTCCGGATATCTTGTCGTTTAATAATTTGATTGGGCAGTTGTGTGACAATGGATTGCTTCCTGAAGCCGAGGAATTGTGTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99233.p1 GENE.S_Transcript_99233~~S_Transcript_99233.p1 ORF type:internal len:132 (-),score=33.93,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|2.7e-13,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|7.4e-06,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|0.033,PPR_3|PF13812.2|1.9e-07,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|3.2e+02,TPR_7|PF13176.2|9.1e+03,TPR_7|PF13176.2|0.86,TPR_7|PF13176.2|0.05,TPR_2|PF07719.13|4.6e+03,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|0.26,TPR_12|PF13424.2|0.0074,TPR_12|PF13424.2|0.1 S_Transcript_99233:1-393(-)
GKGFGRDIVIKEVFEEAVAVGKKEDSKVKMNDVAYNLVLDAFCKHGNFDEALKLFDRMKELHNPPWKLTVNLGSYNVMADGYCAQGRFQEAVEVFMSMGEKNCSPDILSFNNLIGQLCDNGLLPEAEELCG

Click here to download the sequence:
Link to NCBI Protein BLAST