Transcript Information: S_Transcript_99237.p1


Annotated TAIR IDAT3G49240.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1796
Annotation TypeOrtholog
Chromosome Positionchr3:18256086-18257975 | Forward length=629
E-Value6.2E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8168263634109
Replicate 28.5219629893912
Replicate 39.3199170132394
Condition 2: 8 Hour
Replicate 18.595271822478
Replicate 28.675495503039
Replicate 39.2748344540758
Condition 3: 24 Hour
Replicate 16.2032798919855
Replicate 25.9514131162317
Replicate 35.5064921373001


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99237.p1 GENE.S_Transcript_99237~~S_Transcript_99237.p1 ORF type:complete len:655 (+),score=141.25,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|2.5e-09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|4.2e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|0.047,PPR|PF01535.16|43,PPR|PF01535.16|0.0022,PPR|PF01535.16|6e-06,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.067,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|8e-07,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.24,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|41,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.2e-09,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|3.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|35,PPR_3|PF13812.2|0.54,TPR_7|PF13176.2|5.7e+03,TPR_7|PF13176.2|0.48,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|8.1,TPR_7|PF13176.2|0.42,TPR_7|PF13176.2|10,TPR_7|PF13176.2|3.9e+02,TPR_11|PF13414.2|6.8e+03,TPR_11|PF13414.2|7.4,TPR_11|PF13414.2|7.2,TPR_11|PF13414.2|0.14,TPR_11|PF13414.2|0.0042,TPR_12|PF13424.2|9.6e+03,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|2.2,TPR_12|PF13424.2|0.087,TPR_12|PF13424.2|1.3,TPR_12|PF13424.2|18,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|5,TPR_19|PF14559.2|1.2,TPR_19|PF14559.2|0.14,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|0.19,TPR_2|PF07719.13|4.1e+03,TPR_2|PF07719.13|33,TPR_2|PF07719.13|82,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|2.2,TPR_2|PF07719.13|56,TPR_2|PF07719.13|1.2e+03,TPR_14|PF13428.2|3.5,TPR_14|PF13428.2|6.7e+02,TPR_14|PF13428.2|2.9e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|6.8e+02,TPR_14|PF13428.2|14,TPR_14|PF13428.2|6.3e+03,TPR_16|PF13432.2|1.2e+04,TPR_16|PF13432.2|26,TPR_16|PF13432.2|5,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|7.1,TPR_16|PF13432.2|4.2e+03,TPR_16|PF13432.2|8.7e+03,TPR_1|PF00515.24|1.8,TPR_1|PF00515.24|3.8e+02,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|34,TPR_1|PF00515.24|3.7e+02,TPR_1|PF00515.24|1.5e+03 S_Transcript_99237:105-2069(+)
ATGGCCCTCTCCAAACCCTCTTCTTCTTTCATCCACCACCTCAAAACCCTCTCTCAACCCTACTACCACCTTCTTCACCGTATCCACCCTCATTCCCATTCCCATTCACCCATTCCATTTCGTTTCCTCTCCTTCGCCACTCCGGAAGACATCGCCGCCGAACGCCGCCGTCGAAAACGCCAACTCCGTTTGCAACCCCCTCTCTCCTCGTCTCCCTCTCGCCACTCCCAACCCCAAACCCAACGCCCCATAAACCCAAACCCAAACCCCAACTCCCCCAAACTCCCGGACCACGTCTTCTCTCTCACCGGCAACCGGCTCACCCTCCACAACAAGATATTGAAGCTAATTCGCGAGAACGACCTCGACGAAGCCGCTCTCTACACTCGTCATTCCGTCTACTCCAACTGCCGCCCCACCATCTTCACTTGTAACGCCGTCATGTCCGCCCTCCTTCGCCAGTCTCGCTACTCCGATCTTCTCTCTCTTCATCGCTTCATTACTCAAGCTGGTATCCCCTCTAATGTCATCACTTATAATCTCCTTATTACTCTTTATTGTGAGTGTCGAAAACCCGATACTGCTCTTGACCATTACAAGAGGTTACTTGAGGACGCCCCCTTTGATCCTACTATTGAGACTTATAGGATTTTGATTAAGGGTTTGGTTGATAATGGTAGGGTTGAGAAAGCCGTCGAGATCAAGGATGAGATGTTGTCGAGAGGGTTAGATGTCGATGAGGTTGTGTTTGGTTATTTGATGAATGGGTTTGCTAATAACGATAAAGATGGGGATAGGGTTTTGCAGCTTTACGGCGAGTTGAGGGGAAAATTGGAAAATTTGGGTGGAAAGGTGAGGAACGGGATTGTTTACGGGCCATTGATGAAGGGGTATTTTTTGAAGGGGATGGAGCGGGAGGCAATGGAGGTGTTTGAAGAGGCAGTAGCGGTAGGGAAGAAGGAGGATTCGAAGGTTAAGATGAATGATGTGGCGTATAATTTGGTGCTGGATGCTTTTTGTAAGCATGGCAATTTTGACGAGGCGTTGAAGCTATTTGATAGGATGAAGGAGTTGCATAATCCGCCTTGGAAGTTGACTGTTAATTTGGGTAGTTATAATGTGATGGCGGATGGGTATTGTGCTCAAGGGAGGTTTCAGGAAGCGGTTGAGGTGTTCATGAGTATGGGTGAGAAAAATTGTAGTCCGGATATCTTGTCGTTTAATAATTTGATTGGGCAGTTGTGTGACAATGGATTGCTTCCTGAAGCCGAGGAATTGTGTGGGAGAATGGGTGAGAAGGGGGTTAATCCGGATGAAGTTACTTATGTTTTGTTGATGGATGCTTGCTTTAAGGATAATAGGCCGGATGATGCTGCCGGGTATTTCAGGAAGATGATTGATGCAAGTTTGAGGCCCAATTTGGCTGTTTATAATAATTTGGTTGAAGGGTTAGTTAGTTTAGGGAAGATTGATGAGGCAAAGTCATTCTTTGACTTGATGGTGAAGAAGCTCAAGTTCAACTCGGCTAGTTATGAATTTATGTTCAAGGCCTTGTGTGATGTTGGGAAGGTGGATGATGTGCTTCAAATTGTCAGTGATATGTTGGATGAGGGAAGTGTTGACCTTAATGAAGATATGCACCGAATTGTCAAGGATGGGCTGAGAAGTCAAGGCCGAGAGGAGGAGGAATTGGACAGACTTATTGAGCAGAAAGAGAAAGAGAAAGAAGAAGCTAAGAGAAGGGAGGCTGAAGAAGCTGAGAGAGCCAAAGCCAGTGCAAGAGCTGCCGTTGCATCTTTGATTCCGTCTAAGTTGTTTGGGAACAAGGAAGATGGCAAGGAATCTACGGCTTTACCTGGAATTACCAATACAGTATCCTCTAATGAAGCTTCGGCCAGTGGAGAAGCCAGCACAGCAGCAGAATCAGATCTCAAGAGTGTTGATACTCCACATATGACAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99237.p1 GENE.S_Transcript_99237~~S_Transcript_99237.p1 ORF type:complete len:655 (+),score=141.25,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|2.5e-09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|4.2e-07,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|0.047,PPR|PF01535.16|43,PPR|PF01535.16|0.0022,PPR|PF01535.16|6e-06,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.067,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|8e-07,PPR|PF01535.16|0.00028,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.24,PPR_1|PF12854.3|4.7e+03,PPR_1|PF12854.3|41,PPR_1|PF12854.3|0.009,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.2e-09,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|7.3e-06,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|3.1,PPR_3|PF13812.2|17,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.072,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|35,PPR_3|PF13812.2|0.54,TPR_7|PF13176.2|5.7e+03,TPR_7|PF13176.2|0.48,TPR_7|PF13176.2|2.6e+03,TPR_7|PF13176.2|8.1,TPR_7|PF13176.2|0.42,TPR_7|PF13176.2|10,TPR_7|PF13176.2|3.9e+02,TPR_11|PF13414.2|6.8e+03,TPR_11|PF13414.2|7.4,TPR_11|PF13414.2|7.2,TPR_11|PF13414.2|0.14,TPR_11|PF13414.2|0.0042,TPR_12|PF13424.2|9.6e+03,TPR_12|PF13424.2|1.6,TPR_12|PF13424.2|2.2,TPR_12|PF13424.2|0.087,TPR_12|PF13424.2|1.3,TPR_12|PF13424.2|18,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|5,TPR_19|PF14559.2|1.2,TPR_19|PF14559.2|0.14,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|0.19,TPR_2|PF07719.13|4.1e+03,TPR_2|PF07719.13|33,TPR_2|PF07719.13|82,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|2.2,TPR_2|PF07719.13|56,TPR_2|PF07719.13|1.2e+03,TPR_14|PF13428.2|3.5,TPR_14|PF13428.2|6.7e+02,TPR_14|PF13428.2|2.9e+02,TPR_14|PF13428.2|26,TPR_14|PF13428.2|6.8e+02,TPR_14|PF13428.2|14,TPR_14|PF13428.2|6.3e+03,TPR_16|PF13432.2|1.2e+04,TPR_16|PF13432.2|26,TPR_16|PF13432.2|5,TPR_16|PF13432.2|2.8e+02,TPR_16|PF13432.2|7.1,TPR_16|PF13432.2|4.2e+03,TPR_16|PF13432.2|8.7e+03,TPR_1|PF00515.24|1.8,TPR_1|PF00515.24|3.8e+02,TPR_1|PF00515.24|5.1,TPR_1|PF00515.24|34,TPR_1|PF00515.24|3.7e+02,TPR_1|PF00515.24|1.5e+03 S_Transcript_99237:105-2069(+)
MALSKPSSSFIHHLKTLSQPYYHLLHRIHPHSHSHSPIPFRFLSFATPEDIAAERRRRKRQLRLQPPLSSSPSRHSQPQTQRPINPNPNPNSPKLPDHVFSLTGNRLTLHNKILKLIRENDLDEAALYTRHSVYSNCRPTIFTCNAVMSALLRQSRYSDLLSLHRFITQAGIPSNVITYNLLITLYCECRKPDTALDHYKRLLEDAPFDPTIETYRILIKGLVDNGRVEKAVEIKDEMLSRGLDVDEVVFGYLMNGFANNDKDGDRVLQLYGELRGKLENLGGKVRNGIVYGPLMKGYFLKGMEREAMEVFEEAVAVGKKEDSKVKMNDVAYNLVLDAFCKHGNFDEALKLFDRMKELHNPPWKLTVNLGSYNVMADGYCAQGRFQEAVEVFMSMGEKNCSPDILSFNNLIGQLCDNGLLPEAEELCGRMGEKGVNPDEVTYVLLMDACFKDNRPDDAAGYFRKMIDASLRPNLAVYNNLVEGLVSLGKIDEAKSFFDLMVKKLKFNSASYEFMFKALCDVGKVDDVLQIVSDMLDEGSVDLNEDMHRIVKDGLRSQGREEEELDRLIEQKEKEKEEAKRREAEEAERAKASARAAVASLIPSKLFGNKEDGKESTALPGITNTVSSNEASASGEASTAAESDLKSVDTPHMTA*

Click here to download the sequence:
Link to NCBI Protein BLAST