Transcript Information: S_Transcript_99251.p1


Annotated TAIR IDAT4G21170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11286756-11288513 | Reverse length=551
E-Value8E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5657942831451
Replicate 24.9028421238922
Replicate 34.8517655383328
Condition 2: 8 Hour
Replicate 16.7600093488951
Replicate 27.2013957222649
Replicate 36.8963036369057
Condition 3: 24 Hour
Replicate 13.1767886121943
Replicate 23.8513666731048
Replicate 34.7394364486738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99251.p1 GENE.S_Transcript_99251~~S_Transcript_99251.p1 ORF type:5prime_partial len:612 (+),score=105.83,PPR|PF01535.16|0.38,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|2.7,PPR|PF01535.16|0.54,PPR|PF01535.16|0.16,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.00035,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.2e-05,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|53,PPR_2|PF13041.2|64,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|14,PPR_2|PF13041.2|51,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|1.4e-06,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|0.0069,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.25,PPR_1|PF12854.3|53,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.1e+02 S_Transcript_99251:3-1838(+)
CCCCCCCCCAAGTGCCAGAAAGAAACTACCCAAAATCTTTCATCTTTCTTTCTGCTTGCAAAACTGCTAATTCATGTCACAAGTCACAAGTCCCAACTCAGCCGCCAAATGTCTCCAAACACACCCACATTTATCCACCGTTTCATCAAAAATTTCTCTACATCTACCACTCCCATACCCACTTCTTCTACTTGGAGAAACCATGCCAAACAACACCAACTTGTTTCCCAAATTTCCACCATTCTTCTCCAAAGACACAACTGGTCATCTCTTCTTAAAACCCTCAATATCCCTCACAACCTAAGCCCACAATTTTTCCTCCAAATCCTAGACAAAACCCAAACAAACCCAGAAATTTCTCTTGATTTCTTCAACTGGGCAAAGTCCAATCTAGGGTTTCAACCAGACCTCAAAACCCACTGCAAACTGACCCAGATCATAACCGGGTCAAATGACATCCGACCCATTAAACCCATCTTGGATTCCTTCATTGGGTTTGACCCACCAATCCATGTTGTCCATTCCATGCTCCAAGCTTGTAAAGGTACAAACTTGCATGCTCTTGCTTTCAGCTTCATTATTGAATGTTATGCCCAAAAGGGTTTGTATTTTGATGGCTTGTCTGTGTATAGAAAAATTGTATCACTTGGGTATTCGCCTAAAGTTAGTTGTTTGAATAAGGTGCTTGATGTTTTGGATCATGCTGGTGAGTACAAATTGAGTAATTGCTTGTATGGTTCAATGTTTCGAAATGGGATTTTGTTTGATATGGAGACTTGGACTTTTATTGCTAGAATGTTGAGTAGGAGTGGGAGAGTTGAGAAAGTTGTGAGATTGTTGGATTTGGGTGTGTGTAATTTTGAGATTTTTGAGTTAGTGATTAGTTTTTATAGTAGAATGGGTGACTTTGAATCTGCATTTGATCAAGTAAGTGAGATGAGCAGAAAAAAAATCAAGCCAGGTTTTAGTACTTATGGGTCGATTCTCAATGGGGCTTGTAAATTTGGGGATGCAAGTGTGATAGAAATGGTTTTGTGTGCAATGAAAGAGAAGAAGTTGATGTTGGACAATGTGTTGTCTGGTTATGATGTTGTAATTAGGAAGTTGTGTGATTTGGGAAAGACTTATGCAGCTGAATTTTTGTTGAAAAGGGCATGGGATGAGAAGTTTCAGTTAAAAGATGCTACCGTTGGATGTATGCTAAGTGCATTCTGCAAAGAGGGGAGAGGGGATGAGGCCATGTGGTTGTATCGCCTCATTTTGTCAGAGAAGATTGCGGTGAAGAAAAGTTGTTTACAAGACTTGGTGGATAGTCTTTGTGAGAAAGAGCCAACGATAGATTTGTACGAGTTGCTGATCGGATTAATCAAAAGAGGCTTTAGCCCTTGTGTGTCTGATATTTCGAAGTTTATTATGAAACTCTCTAGGAAGGATAAATGGCTTCAAGTAGAGGAGCTTTTGGATGTGATGCTGCAGGCAGAATTGCTGCCTGATTGTGGTTGCTGTCGCTCAATGGTAAAGCATTACTGCTCCTCGGGTCAGATTGATTCTGCGCTCTGGTTTCATGATAAGTTGGGGACATTATGGGATGTTACTACTTACAATATACTCCTTCGAGCAATATTTATGGAAAAGAGGACTGAGGAAGCACTCGTTATTTTTGATTGCATGAGAAGGAAGAATGTAGTGAACACTGCAAGTTTTGTAGTCATGATCAGTGGATTGTCTCAAGAGAAGGAAATGAGAAAGGCCATGCAAGTTCATGATGAAATGTTGAAATTGGGGCTGAAGCCTGGTTTGAGAACTTACAAGAGTTTGGTGTCTGTTTTTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99251.p1 GENE.S_Transcript_99251~~S_Transcript_99251.p1 ORF type:5prime_partial len:612 (+),score=105.83,PPR|PF01535.16|0.38,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|2.7,PPR|PF01535.16|0.54,PPR|PF01535.16|0.16,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.00035,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|1.4,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.2e-05,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|53,PPR_2|PF13041.2|64,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|14,PPR_2|PF13041.2|51,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|1.4e-06,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|0.0069,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.25,PPR_1|PF12854.3|53,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|7.1e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.1e+02 S_Transcript_99251:3-1838(+)
PPPKCQKETTQNLSSFFLLAKLLIHVTSHKSQLSRQMSPNTPTFIHRFIKNFSTSTTPIPTSSTWRNHAKQHQLVSQISTILLQRHNWSSLLKTLNIPHNLSPQFFLQILDKTQTNPEISLDFFNWAKSNLGFQPDLKTHCKLTQIITGSNDIRPIKPILDSFIGFDPPIHVVHSMLQACKGTNLHALAFSFIIECYAQKGLYFDGLSVYRKIVSLGYSPKVSCLNKVLDVLDHAGEYKLSNCLYGSMFRNGILFDMETWTFIARMLSRSGRVEKVVRLLDLGVCNFEIFELVISFYSRMGDFESAFDQVSEMSRKKIKPGFSTYGSILNGACKFGDASVIEMVLCAMKEKKLMLDNVLSGYDVVIRKLCDLGKTYAAEFLLKRAWDEKFQLKDATVGCMLSAFCKEGRGDEAMWLYRLILSEKIAVKKSCLQDLVDSLCEKEPTIDLYELLIGLIKRGFSPCVSDISKFIMKLSRKDKWLQVEELLDVMLQAELLPDCGCCRSMVKHYCSSGQIDSALWFHDKLGTLWDVTTYNILLRAIFMEKRTEEALVIFDCMRRKNVVNTASFVVMISGLSQEKEMRKAMQVHDEMLKLGLKPGLRTYKSLVSVFK*

Click here to download the sequence:
Link to NCBI Protein BLAST