Transcript Information: S_Transcript_99281.p1


Annotated TAIR IDAT5G06680.1
Annotated Gene Namespindle pole body component 98
Annotated Gene Symbol(s)SPC98, ATGCP3, ATSPC98, GCP3
Annotation TypeOrtholog
Chromosome Positionchr5:2056741-2059369 | Forward length=838
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7241928332427
Replicate 26.4846712550804
Replicate 37.518322592639
Condition 2: 8 Hour
Replicate 19.9662578621736
Replicate 210.152989866903
Replicate 310.537902138048
Condition 3: 24 Hour
Replicate 16.8634262318421
Replicate 26.6868453074358
Replicate 35.7942534444186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99281.p1 GENE.S_Transcript_99281~~S_Transcript_99281.p1 ORF type:complete len:888 (+),score=154.62,Spc97_Spc98|PF04130.9|1.7e-111 S_Transcript_99281:104-2665(+)
ATGGAGGATCACAAAGTCCTAGATCTAGTAAAAGAACTAGTCCATCGTTTACTTTCCCAATCCCAAAACCCTAACGATCAAAACCCTAATCACTCATTCGACCCCAATTCCTTCAATCAAGCCCTCCGTTATGCAATTCGCATACTTTCGAGTCGAATGACACCTTCAATTGCACCTGATGAAGCGTCAATGGCTGAATCCATCAAACGTCATCTCGTTACTCAAGGTAAATCATCTGAAGCCCTAACTTTTGCTGATCTTTATTCAAAATTCGCCGCGAAAACTGGTGTTGGTAGTGTTAATAATAAATGGGCTGTTCTTTATTTGTTGAGGGTCATTTCCGAGGACCGTAAAATTGGTGGTCTTATTCAACAGAGCAATATAGTTAATAATGGGGGTTTACCTTTCCTTGAGCCTAAATATGGGGAAAATGATTCTAGGGTTTTGAAGAGTGATGGTAATAAGGACCTGGGTTGGAAACAAGGTGGGGTTTTGATGATTTCGAAGGATCCCGAAAATGTTAGGGATATAGCGTTTAGGGAGTTTGGTAACTTGTTGAAGGAAGAAAATGAGGTTTCGGAGGAGGTTTTGGTTAGGGATGTGCTGTATGCTTGTCAAGGGATTGATGGGAGTTTTGTTAAATTCGACCCCAGTGTTGATGGGTATGTTTTCTTGGGCTCGGTTAAGGTGCCTAGGTCGACGAGGGTTATGGTCTCTAAGCTTTGTGAGTTGGGTTGGTTGTTTAGGAGGGTGAAAGGGTATATTTCAGAGAGCATGGATCGGTTTCCTGCTGAGGATGTCGGGACTGTAGGGCAAGCGTTTTGTGCAGCGTTGCAGGATGAGCTTACCATGTATTATAAGCTGTTGGCGGTGCTTGAAGCGCAGGCGATGAACCCTATACCGTTGATTTCTGAGGCTGCTAGTTCGGGGAATTATCTTTCGCTGAGGAGGTTGTCAGTTTGGTTTGCTGAGCCTATGGTGAAGATGAGGCTCATGGCTGTTTTGGTTGATAGTTGTAAGGTTTTGAAGGGTGGGGCGATGGCGGGGGCAATTCATATGCATGCTCTACATGGGGATCCGCTCGTGCGTGACTTTATGAAACGCTTGCTTCGTAGGGTTTGTTCACCCCTTTTTGAAATGGTTAGAAGCTGGGTCTTGGAAGGAGAGCTTGAGGATATATTTGCTGAGTTTTTTGTCGTGGGGCAGCCTGTCAAGGCCGAGTCTCTTTGGAGAGAGGGCTATCGTCTCCATGCTGGGATGCTTCCTTCATTCATCTCACCATCGCTTGCGCAACGCATCTTGAGGACAGGGAAGTCTATTAACTTCCTTAGGGTTTGTTGTGAGGACCGAGGTTGGGCTGATGCCGCGACTGAAGCTGCTGCAGCTGCTGGAACTACAACTGGTAGAGGTGGCCTTGGGTATGGGGAAACCGATGCTCTTGAATTGCTTGTTGCTGAAGCTGCTAAGAGAATTGATAAGCATTTGTTGGATGTGATCTACAACCAATACAAGTTTAAAGAACATTGTTTGGCTATTAAGCGCTACTTGCTGCTTGGGCAGGGTGATTTTGTGCAGTATCTGATGGATATAGTTGGGCCAGAGCTCTCCGAGCCTGCTAATACTATTAGCACATTTAAGCTGGCTGGTTTGTTGGAAACTGCCATTAGGTCATCAAATGCACAGTATGATGATCGAGACATATTGGACAGGTTGAGGGTCAAGATGATGCCACATAATACTGGAGACCGGGGGTGGGACGTGTTTTCCCTGGACTATGATGCCAGAATCCCGTTAGACACTGTTTTTACAGAATCTGTTATGACCAGGTACCTAAAAATTTTCAATTTCTTGTGGAAGCTAAGGAGAGTTGAACACGCACTGATCAGTGCTTGGAAGACAATGAAGCCAAATTGTATCAGTTCTCACGCCCTTATCAAACTGCAAAATACAGTTAAGATGCAGTTGCTTTCAACAATAAGGAGGTGCCAAGTTCTTTGGGATGAGATGAATCATTTTGTCTCAAACTTGCAATATTATATAATGTTTGAAGTCTTAGAGGTGTCATGGTCCAACTTTTCTAATGAAATGGAAGCAGCAAAGGATCTTGATGACCTGCTTGCAGCCCATGAAAAGTATCTCCATTCCATAGTCGAGAAATCTCTTCTTGGAGAGAGATCGCGAAATCTATATGAGACATTATTTGTTTTGTTTGACCTAATATTGCGATTCCGTAGTCTTGCAGACAGGCTGTACGAAGGCATATATGAGCTGCAAGCGAGGTCTACAGACTCGTCCCGTGGCAAGAAAAACTTATCTAGGCAACTAAGCAAATCAGCAGAACCTAATTCATGGGTGTCTGAGGGCAGGAAAGCCTTAACCCAGCATGCTTCTAAATTTCTTGGTACTATGGGCCAAGAGCTAGATGATATCGGAAATAGATATTCAACCCTACTTACAGGATTCATTTCTCAGCTTCCTGTACAGCAACATATTGATTTGAAGTTCCTTCTTTTCCGGCTCGACTTCACTGAATTCTATAGTCAATCACGCCCCAACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99281.p1 GENE.S_Transcript_99281~~S_Transcript_99281.p1 ORF type:complete len:888 (+),score=154.62,Spc97_Spc98|PF04130.9|1.7e-111 S_Transcript_99281:104-2665(+)
MEDHKVLDLVKELVHRLLSQSQNPNDQNPNHSFDPNSFNQALRYAIRILSSRMTPSIAPDEASMAESIKRHLVTQGKSSEALTFADLYSKFAAKTGVGSVNNKWAVLYLLRVISEDRKIGGLIQQSNIVNNGGLPFLEPKYGENDSRVLKSDGNKDLGWKQGGVLMISKDPENVRDIAFREFGNLLKEENEVSEEVLVRDVLYACQGIDGSFVKFDPSVDGYVFLGSVKVPRSTRVMVSKLCELGWLFRRVKGYISESMDRFPAEDVGTVGQAFCAALQDELTMYYKLLAVLEAQAMNPIPLISEAASSGNYLSLRRLSVWFAEPMVKMRLMAVLVDSCKVLKGGAMAGAIHMHALHGDPLVRDFMKRLLRRVCSPLFEMVRSWVLEGELEDIFAEFFVVGQPVKAESLWREGYRLHAGMLPSFISPSLAQRILRTGKSINFLRVCCEDRGWADAATEAAAAAGTTTGRGGLGYGETDALELLVAEAAKRIDKHLLDVIYNQYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISTFKLAGLLETAIRSSNAQYDDRDILDRLRVKMMPHNTGDRGWDVFSLDYDARIPLDTVFTESVMTRYLKIFNFLWKLRRVEHALISAWKTMKPNCISSHALIKLQNTVKMQLLSTIRRCQVLWDEMNHFVSNLQYYIMFEVLEVSWSNFSNEMEAAKDLDDLLAAHEKYLHSIVEKSLLGERSRNLYETLFVLFDLILRFRSLADRLYEGIYELQARSTDSSRGKKNLSRQLSKSAEPNSWVSEGRKALTQHASKFLGTMGQELDDIGNRYSTLLTGFISQLPVQQHIDLKFLLFRLDFTEFYSQSRPNI*

Click here to download the sequence:
Link to NCBI Protein BLAST