Transcript Information: S_Transcript_99453.p1


Annotated TAIR IDAT3G24520.1
Annotated Gene Nameheat shock transcription factor C1
Annotated Gene Symbol(s)AT-HSFC1, HSFC1
Annotation TypeOrtholog
Chromosome Positionchr3:8941455-8942531 | Forward length=330
E-Value2.3E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0670292221499
Replicate 22.0706177901875
Replicate 32.0292978214965
Condition 2: 8 Hour
Replicate 16.5563497738758
Replicate 26.8056756379751
Replicate 310.554448814117
Condition 3: 24 Hour
Replicate 15.7970240978276
Replicate 25.6476164769539
Replicate 37.6727254824625


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99453.p1 GENE.S_Transcript_99453~~S_Transcript_99453.p1 ORF type:5prime_partial len:309 (+),score=32.39,HSF_DNA-bind|PF00447.13|2.8e-28 S_Transcript_99453:1-927(+)
ACTGATCATCTCATCCGTTGGGGACGAGCTTATAACAGTTTTATTGTGGTCGACCCTTTAGACTTCTCTCAGCGTATCCTCCCCTCCTTTTTCAAGCACAACAATTTCTCTAGCTTCGTTCGCCAGCTCAACACCTATGGATTTCGGAAGGTGGACCCTGACAAATGGGAATTTGCCAACGAGTGGTTCCTACGAGGCCAAAAACAACTCCTCCCAAACATCACTCGTCGCAAACACATGACCAAACCCAATCACCTTCAAGATTACGACGATCAAGAATTACTAGCCGAGATCGAACGGCTCAGAGACGACCAAAAATCCTTGGAACAACAACTCAAGGGCATGAATCAACGGCTAGAAGCCACCGAGAAACGCCCTCAACAAATGATGGCCTTTCTTTGCAAAATTGTTGAGGACCCTGAGATTCTGCCACGTGTCATGATCGAAAGAGACCGTTTTAGTCAGCTCCAACTGTCCTCCTCCCCTGACAAACGACGCCGTTTACTCATGCTGTCATCCTCCTCCTCATCTTCCGGTGTCGCTGCTCAGTCTAACAGTACTGATCTCGACGATGAGGGGACCACCTTAGGGGTAATTTCGTCTTCTGTGTGTAATAATAATGGTACTAATTTTGAGGTTCATGCTTTTCCTGATCAATCCACGTCTTCGCCGGACACGTGTCATAGCCCTGGGTTGCTTTCCCCGGCTGGGCCGGATAATACGGGTCGTGGGCTTCACTATACTAACTGGGCCCATGCTATCTCTGGGCCATTGCCTTTGGGCTCGATACCGGGTCATGACTCATCGTCTCAAATGGGTCCTACAGGTGATGGTAATGTACATGCTGTCGACCATATTCCTGATTCCATGCGTGAGATGGAGAATACACCGCCATATCCTTTTTCACTCTTAGACGGTGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99453.p1 GENE.S_Transcript_99453~~S_Transcript_99453.p1 ORF type:5prime_partial len:309 (+),score=32.39,HSF_DNA-bind|PF00447.13|2.8e-28 S_Transcript_99453:1-927(+)
TDHLIRWGRAYNSFIVVDPLDFSQRILPSFFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKQLLPNITRRKHMTKPNHLQDYDDQELLAEIERLRDDQKSLEQQLKGMNQRLEATEKRPQQMMAFLCKIVEDPEILPRVMIERDRFSQLQLSSSPDKRRRLLMLSSSSSSSGVAAQSNSTDLDDEGTTLGVISSSVCNNNGTNFEVHAFPDQSTSSPDTCHSPGLLSPAGPDNTGRGLHYTNWAHAISGPLPLGSIPGHDSSSQMGPTGDGNVHAVDHIPDSMREMENTPPYPFSLLDGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST