Transcript Information: S_Transcript_99541.p1


Annotated TAIR IDAT1G63810.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23669690-23675542 | Reverse length=1053
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.154367833384
Replicate 211.881578391583
Replicate 312.301006655189
Condition 2: 8 Hour
Replicate 117.835412073035
Replicate 214.985519926135
Replicate 315.616748483193
Condition 3: 24 Hour
Replicate 19.0621971473825
Replicate 28.2374652922595
Replicate 39.1432910735958


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99541.p1 GENE.S_Transcript_99541~~S_Transcript_99541.p1 ORF type:complete len:1051 (+),score=207.47,Nrap|PF03813.10|1.2e-253 S_Transcript_99541:179-3331(+)
ATGGCGGTGGAGCCGTTAGACAACAGAGTCAGCGAGCTCATAAAGAATGCTAAGTTGGAGCTTTCACCTTCCTTCACTAAACTCGTTGATTCTACCCTTTCTTCCATTCAGAAAGTCATCTCCAAAATCCCCAACGATTTTCAGGTTACTGCCGATGAGGCTCCTGGATTTGTACGAGATGTAGGGGCTGACAAAGTGGATTTTAAATTCAAGAAGCCAACTTCCTTTGAACTTGGGGGAAGTTATTCAATTGGTTGCATTGTCAAGCCCGACATCAATGTTGATATTCTTATGCGTTTGCCCAAGGAATGTTTTCATGAGAAGGACTACCTTAATCACCGGTATCACGCCAAAAGGTTCCTGTACCTCTGCATCATTAAGAAGCACCTGGAGTCATCTTCAGTAGTGGGCAAGGTTGAGTGGTCCTGTGTCCAGAATGAAGTTCGCAAACCTTTATTGATCATATACCCAGCTTCAGAAGTTTCTGATGTTCCTGGGTTTTCAGTTAGAATAATCCCTACTGCCACATCTTTGTTCAACATTGCTAAGTTGAATGCAACTCGGAATAATGTTCGTGCCCTAAACCAAGAAGATGCTACTGTAGCTACACCTAAATATAACAGTAGCATTTTGGAGGACATGTTCATTGAGGAGTTTGCTAAAGTCATCAAGGGAATTTTCCAAGAGTGGAAGGAACTTGGGAACGCTTTAGTTTTGTTGAAGATCTGGGCGCGTCAAAGAAGTCCATTTTACAGCCATGATTGCTTGAATGGACACCTAATCACTATTCTAATCGCTTACCTTGCTTCCAAAAGGAGCAGTGGGTTTCTTGGTACATCAATGAATGCCATGCAAATTTTTCGTGTCACTTTGGACTTCATTGCCAATTCAAAATCATGGGAAAAAGGGCTGATTCTCCAGCCCCAAGGTAACCGTCAAATTGCAAAGGAGGAGTTGAAGGAAAGAAGGCAATCTTTGGGATCGTTTCCAGTAGTGATATGCGATTGTTCTGCGAGCTTCAATTTAGCATTCCGCGTTTCAAAGAGCAGTTTTACGGAGCTTCAAGGAGAGGCTGCTTTGAGCCTTGAATGCTTTCAGAAATGTCGAGATAATGGATTTGAAGAGGTATTTCTGACCAAGTGTGACTTTCCAGCCAAGTATGACTATTATGTGAGGTTAAACTTGTATGGGAACAATGGTGTTCATACATCAGGATATTGTGGAGATGATGAATGCTGGAGGATATATGAGGAGAAGGTGCACTCTCTGTTATGGCAGGGTTTAGGTGATAGAGCGAAGTTCATCCGTGTCATTTGGAGAAATTGGTCGAGTAATGTTCGTGTTGAAGATGGTTTCTCGTCACTAGATAAAAAACCATTGCTCATTGGTATTGCTGTGAGCTCCTTGGAAAAGGCTTTCAGGCTGGTGGATATTGGCCCTAATGCAGAGCATAAGGATGAGGCTTCCAAGTTTAGAAAATTTTGGGGGGAAAAGTCGGAGCTTCGTAGATTCAAGGACGGCACCATTGCGGAGAGCACTGTGTGGGAATGCAAGCAGTGGGAGAGACATCTCATCATACAAAGAATTGTTGAGCACATTTTGTCCCGTCATCTTTCTCTTTCAAGTGAAAGGGTTGCTGTTGTCACAGGGCAACTTGATTTTTCTCTGTGTCATGGCGCTGCAGATCCAATATCATTTACTGGTGGCATGCTTGAGGCATATGAATTGTTAGCGAAGCGGTTGCGCCTTTTGGAGGACATTCCTTTGAGGGTATCTAGCATTCAGCCCTTAGATTCAGCTTTCAGGTTCACTTCTGTTTTCCCTCCTGAACCTCACCCTCTGGTTCTTGGAAAAGGCTTCAAGTCAAGATCACTAAAGGTTCTTCCAACCTGTATTCAACCAGTTGATATAATGATTCAGTTGGAAGGATCAGGCAATTGGCCAATGGATGAAGTAGCAACAGAAAAGACTAAATCAGCCTTCCTTCTAAAAATTGGAGAAAGTCTTCAAAGCAATTGGGGTATGAAATGCATTGCTACTGAAGATGGTGTGGATGTGCTACTCTCTGGATATGCTTTTCGTCTTAAGATTTTGCACGAAAGAGGCTTGAGTTTGGTGAGAAGGCAGGGGCATCAAGTCAAGCAAGTGTCTTCGATAGACAAGAAACTTTTCCTACAAAGTCAACACTCTAGCATGATTAATGGTCTGCAGGGCCGTTATCCCATCTACGGGCCTGTTGTCCGGCTTGCGAAACGATGGGCTGCATCACACCTCTTTTCTGCTTGCTTGGGAAGCGAGGCTATTGAGCTCGTGGTTGCACATTTGTTTTTGAATCCTTTGCCATGTCGTTGTCCTAGTTCAAGGATTACAGGTTTCCTGAGGTTCTTGCGATTGTTGTCAGAGCATGATTGGACCTTCTCTCCTTTGATCATTGACATAAATGGTGACTTGACTCCGGAAGATGAGAGTGAAATCAATGTAAACTTTATGTCAAGTAGAAAAGCCAATGAAGGAAGCCCTAGTGAAGTGAGTCCTGCAATGTTCTTGGCTACAACTTATGATAAGTCTTCTGAAGCTTGGACAACCTCCTCTCCGATTCCACTAGAGCTTAAAAGGTTGGTCGCCTATGCTCGTAGCAGTGCAAACTTGTTGGCGAGACTCATAACTGAAGATCAGAATGATTCTCATGGATGGGAGTGCCTTTTCCGGACTCCCCTGAACAACTATGATGCTGTAGTTCTTCTGCACAGAGATAGGTTGGCATATCCCCAGCGCCTACTTTTTCCATCTGATGTGAAAGAAGGGACTTGTGTGGCTCGTGGAAAGGCCAACAAGGATTTCTCTCCCTTCTTGAGGCCGAAGGACATCAAGGGAGGAGCGGACATACTGAAAACTAAGTTGATGGTGGACTTTGATCCACTGCAATGTTATCTTGTGGATCTTGAGGGAGGATTTACAGACACATTCAAGTTGTGGTATGATTCTTTGGGCGGTGATGCCATTGGCATAACATGGATTAAATCTGACTTGAAGAAACGGACTCGAGAGGAAGACGGCAAAGATGCCTTTGATTTATTAAAAGCTGTTGGTGAAGCTGGCAAAGGATTTGTAAGGAGTATCCATCTCCTCAAGGCTCCCAGGCTTGGTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99541.p1 GENE.S_Transcript_99541~~S_Transcript_99541.p1 ORF type:complete len:1051 (+),score=207.47,Nrap|PF03813.10|1.2e-253 S_Transcript_99541:179-3331(+)
MAVEPLDNRVSELIKNAKLELSPSFTKLVDSTLSSIQKVISKIPNDFQVTADEAPGFVRDVGADKVDFKFKKPTSFELGGSYSIGCIVKPDINVDILMRLPKECFHEKDYLNHRYHAKRFLYLCIIKKHLESSSVVGKVEWSCVQNEVRKPLLIIYPASEVSDVPGFSVRIIPTATSLFNIAKLNATRNNVRALNQEDATVATPKYNSSILEDMFIEEFAKVIKGIFQEWKELGNALVLLKIWARQRSPFYSHDCLNGHLITILIAYLASKRSSGFLGTSMNAMQIFRVTLDFIANSKSWEKGLILQPQGNRQIAKEELKERRQSLGSFPVVICDCSASFNLAFRVSKSSFTELQGEAALSLECFQKCRDNGFEEVFLTKCDFPAKYDYYVRLNLYGNNGVHTSGYCGDDECWRIYEEKVHSLLWQGLGDRAKFIRVIWRNWSSNVRVEDGFSSLDKKPLLIGIAVSSLEKAFRLVDIGPNAEHKDEASKFRKFWGEKSELRRFKDGTIAESTVWECKQWERHLIIQRIVEHILSRHLSLSSERVAVVTGQLDFSLCHGAADPISFTGGMLEAYELLAKRLRLLEDIPLRVSSIQPLDSAFRFTSVFPPEPHPLVLGKGFKSRSLKVLPTCIQPVDIMIQLEGSGNWPMDEVATEKTKSAFLLKIGESLQSNWGMKCIATEDGVDVLLSGYAFRLKILHERGLSLVRRQGHQVKQVSSIDKKLFLQSQHSSMINGLQGRYPIYGPVVRLAKRWAASHLFSACLGSEAIELVVAHLFLNPLPCRCPSSRITGFLRFLRLLSEHDWTFSPLIIDINGDLTPEDESEINVNFMSSRKANEGSPSEVSPAMFLATTYDKSSEAWTTSSPIPLELKRLVAYARSSANLLARLITEDQNDSHGWECLFRTPLNNYDAVVLLHRDRLAYPQRLLFPSDVKEGTCVARGKANKDFSPFLRPKDIKGGADILKTKLMVDFDPLQCYLVDLEGGFTDTFKLWYDSLGGDAIGITWIKSDLKKRTREEDGKDAFDLLKAVGEAGKGFVRSIHLLKAPRLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST