Transcript Information: S_Transcript_99838.p1


Annotated TAIR IDAT5G19960.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6744029-6746133 | Forward length=337
E-Value1.2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.673233378401
Replicate 216.58984951224
Replicate 316.774788375781
Condition 2: 8 Hour
Replicate 123.254043188191
Replicate 223.528016528085
Replicate 321.701405571996
Condition 3: 24 Hour
Replicate 116.934018209763
Replicate 215.109207717565
Replicate 319.617145648424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99838.p1 GENE.S_Transcript_99838~~S_Transcript_99838.p1 ORF type:5prime_partial len:387 (+),score=84.75,RRM_1|PF00076.18|3.5e-21,RRM_1|PF00076.18|3.1e+02,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.9e-09 S_Transcript_99838:3-1163(+)
TACCGGAGCCAAATTACTCTCTCTTTCTCTTCAGTCCCCCCTCTCTCTCGCTATTCGTTGTTTTCAGGCTTCAGCGTATGGGAGTTTGAACAGAGGAAGAAGAAGAAGAAGATGACGGTAGACGATGAAAATTCGATATATGTAGGAGGCCTCCCTTACGAATGCACTGAGTCTCAACTTCGTCGCGCCTTCGAATTATACGGCTCCATTATCGCCGTCAAGATAATTAATGATCGTGATGTGGGAGGAAAATGCTATGGCTTTGTCACTTTCACAAATCCTCGATCTGCAGCTGAGGCAATCAATGAGATGGATGGAAGGACTATCGGTGGTCGAGTTGTGCGAGTAAATGAAGTGAAGACAAGAGGTTCAAGTGGGAGATATAACTATGGGCGTGATAATTTTAGGCGAAATGATAGGGACATGGATTGGGATAAGGGCAGAGGTAGACGAGAAAATGACCATGATAAGGACAAGCATAGAAATCATTCCCGAGAGCATGTTGGAAAGAGGGAAAGGGGGTATGAGAATAGTCACGATCATGATCATGCATTAGATCAATTCCAAGGTAGAGATCGAGGTCAAAGCAGGGACATGGAGGAATGGGAACATGGGGTTAGCAGGAATCGTGATAAGGAATGGGAAAGAGATGATGGTCTAATTGCTACTAGAGATAGGCAGCTTGATAGAGCCGATGATCATGATAGATGGGGTGGCAAGAGCAAAGATCGACACGCACAGAGAAAGAATAGCTCTAGCAGTTATGACCAACAAAGTAGAGAAGTTTCATCAGAATCAAGTGATTATTATCATCAGGTGGGTGAGCAGCTGCATTTGTTGACTGCTAGACGAGAAGAACTTCACACAGAGAAATCTGACATGGAGCAAAAACTAGAAGAGCAGAAGCAACTGATAGTTGATTTGCAGAAAAAATCCCTGAAATTGGAAGATGGATTGACTTCTGCAAAAAAATTATCTGCAATGCGTCAAATGCAGTTGACTAAGTTGTATAGATGTTTTCAACAAGTAAAAGAGTATGGTGAAAGACTGAAAAGCTCTGAAAAGGAACTCCAGGAACTTGTAAATGCACTTAGCATGGAGATTGATGCAGATGATGATTTTGGTGTGAGAGATGTGTATCTTGCAAATGGTAAAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99838.p1 GENE.S_Transcript_99838~~S_Transcript_99838.p1 ORF type:5prime_partial len:387 (+),score=84.75,RRM_1|PF00076.18|3.5e-21,RRM_1|PF00076.18|3.1e+02,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.9e-09 S_Transcript_99838:3-1163(+)
YRSQITLSFSSVPPLSRYSLFSGFSVWEFEQRKKKKKMTVDDENSIYVGGLPYECTESQLRRAFELYGSIIAVKIINDRDVGGKCYGFVTFTNPRSAAEAINEMDGRTIGGRVVRVNEVKTRGSSGRYNYGRDNFRRNDRDMDWDKGRGRRENDHDKDKHRNHSREHVGKRERGYENSHDHDHALDQFQGRDRGQSRDMEEWEHGVSRNRDKEWERDDGLIATRDRQLDRADDHDRWGGKSKDRHAQRKNSSSSYDQQSREVSSESSDYYHQVGEQLHLLTARREELHTEKSDMEQKLEEQKQLIVDLQKKSLKLEDGLTSAKKLSAMRQMQLTKLYRCFQQVKEYGERLKSSEKELQELVNALSMEIDADDDFGVRDVYLANGKE*

Click here to download the sequence:
Link to NCBI Protein BLAST