Transcript Information: S_Transcript_99880.p1


Annotated TAIR IDAT5G46910.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19046888-19050880 | Forward length=787
E-Value2.8E-295
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4590771764473
Replicate 27.3799773927818
Replicate 35.5027277825195
Condition 2: 8 Hour
Replicate 15.8408703083057
Replicate 26.179636512372
Replicate 36.2605985972672
Condition 3: 24 Hour
Replicate 14.2263993699751
Replicate 25.811233737525
Replicate 35.2619416649368


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99880.p1 GENE.S_Transcript_99880~~S_Transcript_99880.p1 ORF type:complete len:858 (+),score=150.72,JmjC|PF02373.18|1.1e-39,JmjN|PF02375.13|2.8e-13,zf-C5HC2|PF02928.12|6.6e+03,zf-C5HC2|PF02928.12|9.9e-07 S_Transcript_99880:570-3143(+)
ATGGTGGAAGGAAGGGTTTGTTTGTCGAAAGAGGCTAAAAATAGCTGTTTGGAGTTTCTGAAGCAGAAAAGGCTTCAGCGAAAATCTGAAACTGGAATAGAGGGTGGCAGGGTCTCTAGTACGATGGCCAGAAGTGGGGGAGATGCTTTGAGAGCTTCAGCATCATGTGGCTTCAGATTACATGGTGATGCAGATACATTTTCTTCCTCCATGGCTGTTTCAAATGGAAAGAACTACTTTTCAAAGCGCAAAGTGGACAAATTTAATATGACTGACCTAGATTGGATTGATAGGATTCCAGAATGCCCTGTATACTGTCCAACAAAGGAAGAGTATGAGGATCCTTTGGTTTATCTGCAAAAGATAGCGCCAGAAGCTTCTAAATATGGTATTTGCAAGATCATTTCCCCCATAAGCGCTTCTGTGCCTGCTGGGGTTGTATTGATGAAGGAAGAAGCAGGGTTTAAGTTTACAACTCGGGTACAGCCACTTCGCCTTGCTGAATGGAACACTGATGACAAGGTCACCTTTTTCATGAGTGGAAGAAATTATACATTCCGTGATTTCGAGAAAATGGCGAACAAGGAATTTTCACGTAGATACTGTAGCACTGCTTCTCTTCCTGCTTCTTTCTTGGAAAAGGAATTTTGGCATGAAATCGCTTCTGGGAGGGTAGAATCTGTTGAGTATGCATGTGATGTTGATGGAAGTGCATTTTCATCTTCTCCCAATGACCAACTTGGTAGAAGCAAATGGAATCTAAAGAATCTCTCTCGGCTATCCAAATCTGTCTTGAGGCTTTTGGAAAGAGCAATTCCGGGAGTGACAGATCCTATGCTTTACATTGGAATGCTGTTTAGTATGTTTGCCTGGCATGTGGAAGATCACTATCTGTACAGTATCAATTATCATCATTGTGGTGCACCAAAAACTTGGTATGGTGTACCTGGTGGTGCAGCTTTGCAATTCGAAAAAGTTGTTCGGGAGCATGTTTATGATGAAGATATTTTGTCAACTGATGGAGAGGATGGAGCGTTTGACGTACTCCTTGGGAAAACAACATTGTTCCCGCCAAGCATTCTGTTAGAACGTGGCGTACCAGTCTATAAGGCTGTTCAAAAGCCAGGGGAATTTGTAATCACTTTCCCCAGAGCGTATCATGCAGGATTCAGCCACGGCTTTAATTGCGGCGAGGCAGTAAACTTTGCAATTGGGGACTGGTTTCCATTGGGAGCTGTGGCCAGTCGGCGTTACGCTCATCTTAATAGGGTGCCTCTGCTTCCCCACGAGGAACTTCTTTGTAAGGAAGCAATGCTTCTTTACAGATGTTTAGAATTCAAAGATCCAGATAATTCCATCATGGATTTAATTTCTCAATGTTCAGTTAAGGCTTCTTTTGTCCAACTGATGCGATTCCAGCATCATGCTCGGTGGGGTCTGACAAAAGCAGGGGTGTGTTCAGCAGTTTCAACGGATTGTTATGGCACAATTTTGTGCAGTGAGTGCAAACGTGACTGTTATATTGCTTATGTCAGCTGTAGCTGTTCATTGCATCCTGTGTGCTTGCGCCATGAGATGAGTTCAGTACTTTTCCCTTGTGGTGGTAGTTGCACCTTAGTGTTGAGGGATGATCTTCCGGAATTGGAGGCTGCAGCAAAGAAATTTGAGCAGGAGGACGGTGTGTTGGAGGAGCTCCAACAGCCTAGTAGAAACGAAGATTTGTGCTTGCTTGCTACTATGTTTCCAACTGAAGATGATGGATATTTTCCGTATTGCGAACTAAATTTTGAGTTGCATGCCAATGCTTGTTCACCAAGAGATCTAACACGGAAGCCACAATTTATATATAATGACCATCCTATGTCAACCACTACTATAGAAAATGTTACTAATATGTCAGATACTTCACTTTCTTGTGCTGCCTCCACCCTCTGTTCTCTCCGGGTTAACGAATCCTCTCACCCCAACAATATACAGGAGCACACTAACTCAAATGTAATTAATGACAATGAAGATGTCTCTCACAGCATATGCCAGTCTTCTGTATCATACAGTGAAAGCTTGAGTTCGACCATAGGAAATCAGCATGTGTCAGAAGTTATTCCTAATGTGGATCAGTGCAGTGATGATTCTGATTCAGAGATATTCAGGGTTAGACGCCGATCTTCTTCAAAAATAGATAGAAAAAATGCCAATGATGGGATGAGGGCAGATTCATGTAAACAACAGGGGCTTAAAAGATTGAAGAAAATTAAGCCAGAAGGGAGAGTTTGGGAGGTGGCACCTGCTGATCAATATGCATCTAATTATTTGAAAAGTGATAACTTCAGGGATGCCAAAGTGAGTACTACAACTGATAGATGTGCCAGAGGAACGACAGTACCTGTAACCATCAGAGTGAAAAGGGTGCCTAGTGACACATCAACTTTTAGAAACAATGACCAACCATCCAGTGGTAGATCCCGGCATGAGACAGGGAAGATTATGAGAGAACCGCCTTCATTAGAGATAGGGCCTAAACGTCTTAAAGTGAAAGGGCCTTTGTTTCTGGGCTTAGAGAACAGGTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99880.p1 GENE.S_Transcript_99880~~S_Transcript_99880.p1 ORF type:complete len:858 (+),score=150.72,JmjC|PF02373.18|1.1e-39,JmjN|PF02375.13|2.8e-13,zf-C5HC2|PF02928.12|6.6e+03,zf-C5HC2|PF02928.12|9.9e-07 S_Transcript_99880:570-3143(+)
MVEGRVCLSKEAKNSCLEFLKQKRLQRKSETGIEGGRVSSTMARSGGDALRASASCGFRLHGDADTFSSSMAVSNGKNYFSKRKVDKFNMTDLDWIDRIPECPVYCPTKEEYEDPLVYLQKIAPEASKYGICKIISPISASVPAGVVLMKEEAGFKFTTRVQPLRLAEWNTDDKVTFFMSGRNYTFRDFEKMANKEFSRRYCSTASLPASFLEKEFWHEIASGRVESVEYACDVDGSAFSSSPNDQLGRSKWNLKNLSRLSKSVLRLLERAIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAPKTWYGVPGGAALQFEKVVREHVYDEDILSTDGEDGAFDVLLGKTTLFPPSILLERGVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAVASRRYAHLNRVPLLPHEELLCKEAMLLYRCLEFKDPDNSIMDLISQCSVKASFVQLMRFQHHARWGLTKAGVCSAVSTDCYGTILCSECKRDCYIAYVSCSCSLHPVCLRHEMSSVLFPCGGSCTLVLRDDLPELEAAAKKFEQEDGVLEELQQPSRNEDLCLLATMFPTEDDGYFPYCELNFELHANACSPRDLTRKPQFIYNDHPMSTTTIENVTNMSDTSLSCAASTLCSLRVNESSHPNNIQEHTNSNVINDNEDVSHSICQSSVSYSESLSSTIGNQHVSEVIPNVDQCSDDSDSEIFRVRRRSSSKIDRKNANDGMRADSCKQQGLKRLKKIKPEGRVWEVAPADQYASNYLKSDNFRDAKVSTTTDRCARGTTVPVTIRVKRVPSDTSTFRNNDQPSSGRSRHETGKIMREPPSLEIGPKRLKVKGPLFLGLENRLD*

Click here to download the sequence:
Link to NCBI Protein BLAST