Transcript Information: S_Transcript_99939.p1


Annotated TAIR IDAT1G12450.1
Annotated Gene NameSNARE associated Golgi protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4244496-4245808 | Forward length=303
E-Value6.9E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.990257257426
Replicate 225.35875507068
Replicate 324.346660744509
Condition 2: 8 Hour
Replicate 126.331655726948
Replicate 229.874602756708
Replicate 325.280075360786
Condition 3: 24 Hour
Replicate 130.835917854101
Replicate 223.35478144148
Replicate 327.990317571531


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_99939.p1 GENE.S_Transcript_99939~~S_Transcript_99939.p1 ORF type:complete len:328 (+),score=25.46,SNARE_assoc|PF09335.7|7.7e+03,SNARE_assoc|PF09335.7|6.5e-16,SNARE_assoc|PF09335.7|1.6e+04 S_Transcript_99939:109-1092(+)
ATGAGTTGTATCGGCAATGGGGGCGACAACGACGTCGTCCCGGTGCCGGAACTGAAGCTCAGAATCCCCGACAAGAATGGGGATTACATTGATTTACACCGACAACCAGGAATAAACAACAACAACAACAACAACAACAACAAATATCTTGACGACGAAGAACAAGCAGGTTCTTCCTCCTCTTCTGAAGACGGTTGTTTGGAATTAGGGGATTTGTCGGAACCTTCCACTCCTAGATTACGATGCCGGATCTTTTGTAAATGGGTCAAATTCTTCTTCTTGTTTGTCTTTCTTGCTGCTCTCGTCTTCGTTTTCTTCAAATGGGTCGGACCCTTTTCTATGGATAAGGGGATAATTCCCATTATAAACTGGGAGAGGTCGACGTTTAAGACTCCAACGCTCGTGTTTATACTGTTTATGACTGTGGCACTATTTCCCACTATTCTGTTACCATCTTCTCCTTCAATGTGGGTGGCTGGGATGACTTTTGGTTATGGATTGGGCTTCCTACTAATCATGTCAGCAGTGATCATCGGTGTGTCTCTACCTTACCTGATTGGCTCCCTCTTCTACCATAAAATACAAGGTTGGATGGAACGGTACCCAAAGAAAGCTTCTCTCATAAGGTTAGCTGGTGAAGGAGAATGGTTTGATCAGTTTAGAACTGTGACTTTAATAAGGATATCTCCTTTTCCCTACATCATCTACAATTATTGTGCTGTCGCAACAAATGTGAAGTATGGACCCTACATATTGGGGTCGATCTTGGGAATGGTGCCAGATGTTTTTGTTGCAATCTATACTGGTATATTGATCAAGACGTTGGCAGATGCATCAGACAAACGGCATACGCTTTCTGCAAAGGAAATTATTTTTAATGTTATTGGATTTGCTGCAACAGTGGCTACAACGATACTCTGTACCATTTTTGCTAAAAGACGACTCAAGACAATGCCTCTTGAAGATGAGCCACTTCTGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_99939.p1 GENE.S_Transcript_99939~~S_Transcript_99939.p1 ORF type:complete len:328 (+),score=25.46,SNARE_assoc|PF09335.7|7.7e+03,SNARE_assoc|PF09335.7|6.5e-16,SNARE_assoc|PF09335.7|1.6e+04 S_Transcript_99939:109-1092(+)
MSCIGNGGDNDVVPVPELKLRIPDKNGDYIDLHRQPGINNNNNNNNNKYLDDEEQAGSSSSSEDGCLELGDLSEPSTPRLRCRIFCKWVKFFFLFVFLAALVFVFFKWVGPFSMDKGIIPIINWERSTFKTPTLVFILFMTVALFPTILLPSSPSMWVAGMTFGYGLGFLLIMSAVIIGVSLPYLIGSLFYHKIQGWMERYPKKASLIRLAGEGEWFDQFRTVTLIRISPFPYIIYNYCAVATNVKYGPYILGSILGMVPDVFVAIYTGILIKTLADASDKRHTLSAKEIIFNVIGFAATVATTILCTIFAKRRLKTMPLEDEPLLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST