IMPPAT Phytochemical information: 
Paclitaxel

Paclitaxel
Summary

SMILES: CC(=O)O[C@H]1C(=O)[C@]2(C)[C@@H](O)C[C@@H]3[C@]([C@H]2[C@@H]([C@]2(C(C1=C(C)[C@@H](OC(=O)[C@@H]([C@H](c1ccccc1)NC(=O)c1ccccc1)O)C2)(C)C)O)OC(=O)c1ccccc1)(CO3)OC(=O)C
InChI: InChI=1S/C47H51NO14/c1-25-31(60-43(56)36(52)35(28-16-10-7-11-17-28)48-41(54)29-18-12-8-13-19-29)23-47(57)40(61-42(55)30-20-14-9-15-21-30)38-45(6,32(51)22-33-46(38,24-58-33)62-27(3)50)39(53)37(59-26(2)49)34(25)44(47,4)5/h7-21,31-33,35-38,40,51-52,57H,22-24H2,1-6H3,(H,48,54)/t31-,32-,33+,35-,36+,37+,38-,40-,45+,46-,47+/m0/s1
InChIKey: RCINICONZNJXQF-MZXODVADSA-N
DeepSMILES: CC=O)O[C@H]C=O)[C@]C)[C@@H]O)C[C@@H][C@][C@H]6[C@@H][C@]CC%12=CC)[C@@H]OC=O)[C@@H][C@H]cccccc6))))))NC=O)cccccc6)))))))))O))))C6))))C)C))O))OC=O)cccccc6))))))))))CO4))OC=O)C
Scaffold Graph/Node/Bond level: O=C(CC(NC(=O)c1ccccc1)c1ccccc1)OC1C=C2CC(=O)C3CCC4OCC4C3C(OC(=O)c3ccccc3)C(C2)C1
Scaffold Graph/Node level: OC(CC(NC(O)C1CCCCC1)C1CCCCC1)OC1CC2CC(O)C3CCC4OCC4C3C(OC(O)C3CCCCC3)C(C2)C1
Scaffold Graph level: CC(CC1CC2CC(C)C3CCC4CCC4C3C(CC(C)C3CCCCC3)C(C1)C2)CC(CC(C)C1CCCCC1)C1CCCCC1
Functional groups: CC(=O)OC; CC(C)=C(C)C; CC(C)=O; CO; COC; COC(C)=O; cC(=O)NC; cC(=O)OC
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Prenol lipids
ClassyFire Subclass: Diterpenoids
NP Classifier Biosynthetic pathway: Terpenoids
NP Classifier Superclass: Diterpenoids
NP Classifier Class: Taxane diterpenoids|Tetracyclic diterpenoids
Synonymous chemical names:
paclitaxel, taxol
External chemical identifiers:
CID:36314; ChEMBL:CHEMBL428647; ChEBI:45863; ZINC:ZINC000096006020; FDASRS:P88XT4IS4D; SureChEMBL:SCHEMBL3976; MolPort-001-742-627
Chemical structure download


Paclitaxel
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 0
Log P RDKit 0
Topological polar surface area (Å2) RDKit
Number of hydrogen bond acceptors RDKit
Number of hydrogen bond donors RDKit
Number of carbon atoms RDKit
Number of heavy atoms RDKit
Number of heteroatoms RDKit
Number of nitrogen atoms RDKit
Number of sulfur atoms RDKit
Number of chiral carbon atoms RDKit
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit
Number of sp2 hybridized carbon atoms RDKit
Number of sp3 hybridized carbon atoms RDKit
Shape complexity RDKit
Number of rotatable bonds RDKit
Number of aliphatic carbocycles RDKit
Number of aliphatic heterocycles RDKit
Number of aliphatic rings RDKit
Number of aromatic carbocycles RDKit
Number of aromatic heterocycles RDKit
Number of aromatic rings RDKit
Total number of rings RDKit
Number of saturated carbocycles RDKit
Number of saturated heterocycles RDKit
Number of saturated rings RDKit
Number of Smallest Set of Smallest Rings (SSSR) RDKit


Paclitaxel
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 2
Lipinski’s rule of 5 filter RDKit Failed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Bad
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.1298


Paclitaxel
ADMET properties
Property nameToolProperty value
Bioavailability score SwissADME 0.17
Solubility class [ESOL] SwissADME Poorly soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -8.91
Number of PAINS structural alerts SwissADME 0.0
Number of Brenk structural alerts SwissADME 2.0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME Yes


Paclitaxel
Predicted human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000070846PKP2700
ENSP00000071281FHL1700
ENSP00000206249ESR1911
ENSP00000215832MAPK1801
ENSP00000216294SNAPC1700
ENSP00000217026MYBL2800
ENSP00000217133TUBB1908
ENSP00000219070MMP2949
ENSP00000221132TNFRSF10A862
ENSP00000222982CYP3A5854
ENSP00000225474CSF3910
ENSP00000225577RPS6KB1829
ENSP00000225831CCL2729
ENSP00000232219RBP1700
ENSP00000233121MAPRE3854
ENSP00000237596PKD2724
ENSP00000237612ABCG2906
ENSP00000241052CAT763
ENSP00000245185MT2A700
ENSP00000246337UROD700
ENSP00000246635KRT13700
ENSP00000251849RAF1955
ENSP00000252229MICB700
ENSP00000252723EPO738
ENSP00000256442CCNB1968
ENSP00000256443CDK7700
ENSP00000256593GSTM5700
ENSP00000257497ANXA1721
ENSP00000257637TMEM243700
ENSP00000258743IL6868
ENSP00000260433CYP19A1816
ENSP00000260447GCHFR700
ENSP00000260682CYP2C9753
ENSP00000260731KIF11918
ENSP00000260766PLCE1700
ENSP00000261597NDC80857
ENSP00000261769CDH1849
ENSP00000262461SLC12A2938
ENSP00000262968TJP3700
ENSP00000263025MAPK3765
ENSP00000263341IL1B786
ENSP00000263817ABCB11745
ENSP00000263934KIF1B791
ENSP00000263980SLC9A1726
ENSP00000264010CTCF700
ENSP00000264498FGF2780
ENSP00000264634WNT5A820
ENSP00000264657STAT3952
ENSP00000264775PPAP2A700
ENSP00000265723ABCB4787
ENSP00000265724ABCB1935
ENSP00000265729SRI725
ENSP00000266970CDK2782
ENSP00000267101ERBB3794
ENSP00000267163RB1744
ENSP00000268171FURIN727
ENSP00000269305TP53978
ENSP00000269571ERBB2948
ENSP00000270202AKT1965
ENSP00000271452NUF2826
ENSP00000272430RTKN700
ENSP00000273550FTH1700
ENSP00000274276OSMR700
ENSP00000275493EGFR982
ENSP00000285930AKR1B1724
ENSP00000286186CASP10772
ENSP00000286574WIF1700
ENSP00000288167IL17RB700
ENSP00000290524RFX5700
ENSP00000291527TFF1700
ENSP00000296181ITGB5700
ENSP00000296370S100P700
ENSP00000296871CSF2846
ENSP00000298048MELK800
ENSP00000300900CA4836
ENSP00000301071TUBA1A817
ENSP00000301178AXL733
ENSP00000301633BIRC5753
ENSP00000301838FADD739
ENSP00000302100LGALS4700
ENSP00000302564BCL2L1864
ENSP00000304414CXCR6700
ENSP00000305651CXCL10800
ENSP00000306512IL8947
ENSP00000307078KIF5B931
ENSP00000307706MT1E700
ENSP00000307786CYCS953
ENSP00000307859SLC22A18700
ENSP00000308450CDC20899
ENSP00000308937PMP22700
ENSP00000311032CASP3972
ENSP00000311538ARR3700
ENSP00000312455CFLAR953
ENSP00000313875CD46700
ENSP00000315130CLU721
ENSP00000318822BID700
ENSP00000320295900
ENSP00000320821KIF1C741
ENSP00000322791KIF1A843
ENSP00000324173HSPA5818
ENSP00000326119PMAIP1825
ENSP00000327251NOS2786
ENSP00000329243KRT7769
ENSP00000329623BCL2877
ENSP00000330237CASP9760
ENSP00000332371COL7A1700
ENSP00000336528NR1I2974
ENSP00000336702EIF5A700
ENSP00000337450CYP3A7838
ENSP00000337915CYP3A4977
ENSP00000338345SNCA800
ENSP00000339001TUBB912
ENSP00000339191CAV1945
ENSP00000340820MAPT952
ENSP00000341289TUBB4B945
ENSP00000341674ANXA8700
ENSP00000342007CYP1A2725
ENSP00000342082SLPI800
ENSP00000343040HMGB1786
ENSP00000344220PDPK1700
ENSP00000344352ATF3820
ENSP00000344456CTNNB1762
ENSP00000345344CTSL753
ENSP00000345571E2F1700
ENSP00000345728ATP7A700
ENSP00000346037RPLP1700
ENSP00000347979FAS736
ENSP00000349078FDPS723
ENSP00000350094QRICH1700
ENSP00000351273CASP8933
ENSP00000353375MAP4867
ENSP00000353483MAPK8960
ENSP00000353508MAP2837
ENSP00000353820CYP2D6729
ENSP00000353878BAK1784
ENSP00000354347GFPT1700
ENSP00000355361CD47763
ENSP00000355759PARP1773
ENSP00000356022SOD2700
ENSP00000356438PTGS2850
ENSP00000356694FASLG947
ENSP00000358022MCL1905
ENSP00000358327CASP7953
ENSP00000358417PHGDH800
ENSP00000359478ABCC2742
ENSP00000359663CD40LG727
ENSP00000360025GADD45A738
ENSP00000360266JUN953
ENSP00000360317CYP2C8987
ENSP00000360683PTPN1818
ENSP00000361021PTEN828
ENSP00000361125VEGFA898
ENSP00000361298KIF2C847
ENSP00000361405MMP9841
ENSP00000361608ABCC10951
ENSP00000361666SLC22A7737
ENSP00000361850PLAU824
ENSP00000363524KIF4A709
ENSP00000363822AR743
ENSP00000364721MAPRE1819
ENSP00000365280ID1810
ENSP00000366237DFFA729
ENSP00000366307THBD800
ENSP00000366525FTL700
ENSP00000367755CAMKMT841
ENSP00000368924TFAP2A700
ENSP00000369127DNAJA1800
ENSP00000369320RS1938
ENSP00000369703TUBB2A755
ENSP00000370129AKR1C2724
ENSP00000371798FSCN1700
ENSP00000375892AKT2743
ENSP00000376943BCL2L11830
ENSP00000377833ANXA4700
ENSP00000378577CLDN3700
ENSP00000378699CDK1970
ENSP00000379204BMP7700
ENSP00000380252NFE2L2700
ENSP00000381607GSTP1734
ENSP00000382004CTNND1800
ENSP00000382177MYO5A730
ENSP00000382342ABCC1795
ENSP00000382423MAP3K1739
ENSP00000384886IFI30700
ENSP00000386884CXCR4754
ENSP00000389103RPL23A700
ENSP00000389770FXYD3700
ENSP00000392395CHFR804
ENSP00000394794PTPN13700
ENSP00000398698TNF872
ENSP00000398736CYR61757
ENSP00000404503BBC3722
ENSP00000408617HDAC9700
ENSP00000409126ANO6831
ENSP00000411532TOP2A855
ENSP00000412237IL10846
ENSP00000414303BDNF814
ENSP00000415481PROM1756
ENSP00000415890GPR35700
ENSP00000417281MDM2757
ENSP00000419970POR832
ENSP00000429633MYBL1784
ENSP00000443194NAT1700
ENSP00000445175LDHA725
ENSP00000451560TUBB3710
ENSP00000463999AURKB910
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.