IMPPAT Phytochemical information: 
Liriodenine

Liriodenine
Summary

SMILES: O=C1c2ccccc2-c2c3c1nccc3cc1c2OCO1
InChI: InChI=1S/C17H9NO3/c19-16-11-4-2-1-3-10(11)14-13-9(5-6-18-15(13)16)7-12-17(14)21-8-20-12/h1-7H,8H2
InChIKey: MUMCCPUVOAUBAN-UHFFFAOYSA-N
DeepSMILES: O=Ccccccc6-ccc%10nccc6ccc%10OCO5
Scaffold Graph/Node/Bond level: O=C1c2ccccc2-c2c3c(cc4ccnc1c24)OCO3
Scaffold Graph/Node level: OC1C2CCCCC2C2C3OCOC3CC3CCNC1C32
Scaffold Graph level: CC1C2CCCCC2C2C3CCCC3CC3CCCC1C32
Functional groups: cC(=O)c; cnc; c1cOCO1
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Alkaloids and derivatives
ClassyFire Class: Aporphines
NP Classifier Biosynthetic pathway: Alkaloids
NP Classifier Superclass: Tyrosine alkaloids
NP Classifier Class: Aporphine alkaloids|Isoquinoline alkaloids
Synonymous chemical names:
Oxoushinsunine, Liriodenine, oxoushinsunine, oxoushinsuine (liriodenine), liriodenine
External chemical identifiers:
CID:CID_10144; ChEMBL:CHEMBL37736; ChEBI:CHEBI:70649; ZINC:ZINC000000006256; FDASRS:E134R7X4O9; SureChEMBL:SCHEMBL165803; MolPort-005-981-187
Chemical structure download


Liriodenine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 275.26
Log P RDKit 3.17
Topological polar surface area (Å2) RDKit 48.42
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 17
Number of heavy atoms RDKit 21
Number of heteroatoms RDKit 4
Number of nitrogen atoms RDKit 1
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 16
Number of sp3 hybridized carbon atoms RDKit 1
Shape complexity RDKit 0.06
Number of rotatable bonds RDKit 0
Number of aliphatic carbocycles RDKit 1
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 2
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 5
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 5


Liriodenine
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.494307


Liriodenine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.57
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME Yes


Liriodenine
Human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000269305TP53800
ENSP00000255380CHRM3800
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.