IMPPAT Phytochemical information: 
Chelidonic acid

Chelidonic acid
Summary

SMILES: OC(=O)c1oc(cc(=O)c1)C(=O)O
InChI: InChI=1S/C7H4O6/c8-3-1-4(6(9)10)13-5(2-3)7(11)12/h1-2H,(H,9,10)(H,11,12)
InChIKey: PBAYDYUZOSNJGU-UHFFFAOYSA-N
DeepSMILES: OC=O)coccc=O)c6)))C=O)O
Scaffold Graph/Node/Bond level: O=c1ccocc1
Scaffold Graph/Node level: OC1CCOCC1
Scaffold Graph level: CC1CCCCC1
Functional groups: cC(=O)O; coc; c=O
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organoheterocyclic compounds
ClassyFire Class: Pyrans
ClassyFire Subclass: Pyranones and derivatives
NP Classifier Biosynthetic pathway: Polyketides
Synonymous chemical names:
chelidonic-acid, chelidonic acid
External chemical identifiers:
CID:CID_7431; ChEBI:CHEBI:3586; ZINC:ZINC000000125011; FDASRS:T33U4W5K6O; SureChEMBL:SCHEMBL70569; MolPort-000-928-005
Chemical structure download


Chelidonic acid
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 184.1
Log P RDKit 0.04
Topological polar surface area (Å2) RDKit 104.81
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 2
Number of carbon atoms RDKit 7
Number of heavy atoms RDKit 13
Number of heteroatoms RDKit 6
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 7
Number of sp3 hybridized carbon atoms RDKit 0
Shape complexity RDKit 0
Number of rotatable bonds RDKit 2
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 1
Total number of rings RDKit 1
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 1


Chelidonic acid
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 2
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Good
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.671518


Chelidonic acid
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.56
Solubility class [ESOL] SwissADME Very soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -7.71
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


Chelidonic acid
Human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000350928GAD1837
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.