IMPPAT Phytochemical information: 
Trimethylamine

Trimethylamine
Summary

SMILES: CN(C)C
InChI: InChI=1S/C3H9N/c1-4(2)3/h1-3H3
InChIKey: GETQZCLCWQTVFV-UHFFFAOYSA-N
DeepSMILES: CNC)C
Functional groups: CN(C)C
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Organic nitrogen compounds
ClassyFire Class: Organonitrogen compounds
ClassyFire Subclass: Amines
Synonymous chemical names:
trimethylamine, trimethylamines
External chemical identifiers:
CID:CID_1146; ChEMBL:CHEMBL439723; ChEBI:CHEBI:18139; ZINC:ZINC000008216125; FDASRS:LHH7G8O305; SureChEMBL:SCHEMBL5582
Chemical structure download


Trimethylamine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 59.11
Log P RDKit 0.18
Topological polar surface area (Å2) RDKit 3.24
Number of hydrogen bond acceptors RDKit 1
Number of hydrogen bond donors RDKit 0
Number of carbon atoms RDKit 3
Number of heavy atoms RDKit 4
Number of heteroatoms RDKit 1
Number of nitrogen atoms RDKit 1
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 0
Number of sp3 hybridized carbon atoms RDKit 3
Shape complexity RDKit 1
Number of rotatable bonds RDKit 0
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 0
Number of aliphatic rings RDKit 0
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 0
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 0


Trimethylamine
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 3
Ghose filter RDKit Failed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.384463


Trimethylamine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Very soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -6.48
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 0
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No


Trimethylamine
Human target proteins
Protein identifierHGNC symbolCombined score from STITCH database
ENSP00000258034TAAR5793
ENSP00000260731KIF11800
ENSP00000356729FMO3974
The human target proteins were predicted using STITCH, a database of Chemical-Protein interaction networks.