IMPPAT Phytochemical information: 
Calomelanol D

Calomelanol D
Summary

SMILES: O=C1Oc2cc(O)c3c(c2C(C1)c1ccccc1)oc(c(c3=O)O)c1ccc(cc1)O
InChI: InChI=1S/C24H16O7/c25-14-8-6-13(7-9-14)23-22(29)21(28)20-16(26)11-17-19(24(20)31-23)15(10-18(27)30-17)12-4-2-1-3-5-12/h1-9,11,15,25-26,29H,10H2
InChIKey: GQAGUHWGUCXTSY-UHFFFAOYSA-N
DeepSMILES: O=COcccO)ccc6CC%10)cccccc6))))))))occc6=O))O))cccccc6))O
Scaffold Graph/Node/Bond level: O=C1CC(c2ccccc2)c2c(ccc3c(=O)cc(-c4ccccc4)oc23)O1
Scaffold Graph/Node level: OC1CC(C2CCCCC2)C2C(CCC3C(O)CC(C4CCCCC4)OC32)O1
Scaffold Graph level: CC1CC2CCC3C(C)CC(C4CCCCC4)CC3C2C(C2CCCCC2)C1
Functional groups: cOC(=O)C; cO; coc; c=O
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Phenylpropanoids and polyketides
ClassyFire Class: Flavonoids
ClassyFire Subclass: Pyranoflavonoids
NP Classifier Biosynthetic pathway: Shikimates and Phenylpropanoids
NP Classifier Superclass: Flavonoids
NP Classifier Class: Flavonols|Neoflavonoids
Synonymous chemical names:
calomelanol d
External chemical identifiers:
CID:CID_44259049; ChEBI:CHEBI:166624
Chemical structure download


Calomelanol D
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 416.39
Log P RDKit 4.02
Topological polar surface area (Å2) RDKit 117.2
Number of hydrogen bond acceptors RDKit 7
Number of hydrogen bond donors RDKit 3
Number of carbon atoms RDKit 24
Number of heavy atoms RDKit 31
Number of heteroatoms RDKit 7
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 1
Stereochemical complexity RDKit 0.04
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 22
Number of sp3 hybridized carbon atoms RDKit 2
Shape complexity RDKit 0.08
Number of rotatable bonds RDKit 2
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 3
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 4
Total number of rings RDKit 5
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 5


Calomelanol D
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.333708


Calomelanol D
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Poorly soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.96
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME Yes
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No