IMPPAT Phytochemical information: 
Cyanidin 4'-glucoside

Cyanidin 4'-glucoside
Summary

SMILES: OCC1OC(Oc2ccc(cc2O)c2[o+]c3cc(O)cc(c3cc2O)O)C(C(C1O)O)O
InChI: InChI=1S/C21H20O11/c22-7-16-17(27)18(28)19(29)21(32-16)31-14-2-1-8(3-12(14)25)20-13(26)6-10-11(24)4-9(23)5-15(10)30-20/h1-6,16-19,21-22,27-29H,7H2,(H3-,23,24,25,26)/p+1
InChIKey: CSNMEDJMOXSNRZ-UHFFFAOYSA-O
DeepSMILES: OCCOCOcccccc6O)))c[o+]cccO)ccc6cc%10O))))O)))))))))))))CCC6O))O))O
Scaffold Graph/Node/Bond level: c1ccc2[o+]c(-c3ccc(OC4CCCCO4)cc3)ccc2c1
Scaffold Graph/Node level: C1CCC(OC2CCC(C3CCC4CCCCC4O3)CC2)OC1
Scaffold Graph level: C1CCC(CC2CCC(C3CCC4CCCCC4C3)CC2)CC1
Functional groups: CO; cOC(C)OC; cO; c[o+]c
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Phenylpropanoids and polyketides
ClassyFire Class: Flavonoids
ClassyFire Subclass: Flavonoid glycosides
Synonymous chemical names:
cyanidin 4'-glucoside
External chemical identifiers:
CID:CID_73981555; ChEBI:CHEBI:175594
Chemical structure download


Cyanidin 4'-glucoside
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 449.39
Log P RDKit 0.38
Topological polar surface area (Å2) RDKit 191.6
Number of hydrogen bond acceptors RDKit 10
Number of hydrogen bond donors RDKit 8
Number of carbon atoms RDKit 21
Number of heavy atoms RDKit 32
Number of heteroatoms RDKit 11
Number of nitrogen atoms RDKit 0
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 5
Stereochemical complexity RDKit 0.24
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 15
Number of sp3 hybridized carbon atoms RDKit 6
Shape complexity RDKit 0.29
Number of rotatable bonds RDKit 4
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 4
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 1
Number of saturated rings RDKit 1
Number of Smallest Set of Smallest Rings (SSSR) RDKit 4


Cyanidin 4'-glucoside
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 1
Lipinski’s rule of 5 RDKit Passed
Number of Ghose rule violations RDKit 0
Ghose rule RDKit Passed
Veber rule RDKit Bad
Egan rule RDKit Bad
GSK 4/400 rule RDKit Bad
Pfizer 3/75 rule RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.26


Cyanidin 4'-glucoside
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.17
Solubility class [ESOL] SwissADME Soluble
Solubility class [Silicos-IT] SwissADME Soluble
Blood Brain Barrier permeation SwissADME No
Gastrointestinal absorption SwissADME Low
Log Kp (Skin permeation, cm/s) SwissADME -8.94
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME No
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME No
CYP3A4 inhibitor SwissADME No
P-glycoprotein substrate SwissADME No