IMPPAT Phytochemical information: 
Globoside

Globoside
Summary

SMILES: CCCCCCCCCCCCC/C=C/[C@H]([C@@H](NC(=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)CO[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O[C@@H]1O[C@H](CO)[C@@H]([C@@H]([C@H]1O)O)O[C@H]1O[C@H](CO)[C@@H]([C@@H]([C@H]1O)O[C@@H]1O[C@H](CO)[C@@H]([C@@H]([C@H]1NC(=O)C)O)O)O)O
InChI: InChI=1S/C68H124N2O23/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-27-29-31-33-35-37-39-52(77)70-46(47(76)38-36-34-32-30-28-26-17-15-13-11-9-7-5-2)44-86-66-59(83)57(81)62(50(42-73)89-66)91-67-60(84)58(82)63(51(43-74)90-67)92-68-61(85)64(55(79)49(41-72)88-68)93-65-53(69-45(3)75)56(80)54(78)48(40-71)87-65/h18-19,36,38,46-51,53-68,71-74,76,78-85H,4-17,20-35,37,39-44H2,1-3H3,(H,69,75)(H,70,77)/b19-18-,38-36+/t46-,47+,48+,49+,50+,51+,53+,54-,55-,56+,57+,58+,59+,60+,61+,62+,63-,64-,65-,66+,67-,68+/m0/s1
InChIKey: WSOCRZVLWFROQD-NCMUZYOHSA-N
DeepSMILES: CCCCCCCCCCCCC/C=C/[C@H][C@@H]NC=O)CCCCCCCCCCCCC/C=C\CCCCCCCC)))))))))))))))))))))))))CO[C@@H]O[C@H]CO))[C@H][C@@H][C@H]6O))O))O[C@@H]O[C@H]CO))[C@@H][C@@H][C@H]6O))O))O[C@H]O[C@H]CO))[C@@H][C@@H][C@H]6O))O[C@@H]O[C@H]CO))[C@@H][C@@H][C@H]6NC=O)C))))O))O)))))))O))))))))))))))))))O
Scaffold Graph/Node/Bond level: C1CCC(OC2CCOC(OC3CCC(OC4CCCOC4)OC3)C2)OC1
Scaffold Graph/Node level: C1CCC(OC2CCOC(OC3CCC(OC4CCCOC4)OC3)C2)OC1
Scaffold Graph level: C1CCC(CC2CCC(CC3CCCC(CC4CCCCC4)C3)CC2)CC1
Functional groups: C/C=C/C; CC(=O)NC; C/C=C\C; CO[C@@H](C)OC; CO; CO[C@H](C)OC
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Lipids and lipid-like molecules
ClassyFire Class: Sphingolipids
ClassyFire Subclass: Glycosphingolipids
NP Classifier Biosynthetic pathway: Fatty acids
NP Classifier Superclass: Sphingolipids
NP Classifier Class: Neutral glycosphingolipids
Synonymous chemical names:
globoside
External chemical identifiers:
CID:CID_86583361; ChEBI:CHEBI:84125
Chemical structure download


Globoside
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 1337.73
Log P RDKit 3.9
Topological polar surface area (Å2) RDKit 395.03
Number of hydrogen bond acceptors RDKit 23
Number of hydrogen bond donors RDKit 15
Number of carbon atoms RDKit 68
Number of heavy atoms RDKit 93
Number of heteroatoms RDKit 25
Number of nitrogen atoms RDKit 2
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 22
Stereochemical complexity RDKit 0.32
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 6
Number of sp3 hybridized carbon atoms RDKit 62
Shape complexity RDKit 0.91
Number of rotatable bonds RDKit 50
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 4
Number of aliphatic rings RDKit 4
Number of aromatic carbocycles RDKit 0
Number of aromatic heterocycles RDKit 0
Number of aromatic rings RDKit 0
Total number of rings RDKit 4
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 4
Number of saturated rings RDKit 4
Number of Smallest Set of Smallest Rings (SSSR) RDKit 4


Globoside
Drug-likeness properties
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 3
Lipinski’s rule of 5 RDKit Failed
Number of Ghose rule violations RDKit 3
Ghose rule RDKit Failed
Veber rule RDKit Bad
Egan rule RDKit Bad
GSK 4/400 rule RDKit Bad
Pfizer 3/75 rule RDKit Bad
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.03