IMPPAT Phytochemical information: 
Jatrorrhizine

Jatrorrhizine
Summary

SMILES: COc1cc2-c3cc4ccc(c(c4c[n+]3CCc2cc1O)OC)OC
InChI: InChI=1S/C20H19NO4/c1-23-18-5-4-12-8-16-14-10-19(24-2)17(22)9-13(14)6-7-21(16)11-15(12)20(18)25-3/h4-5,8-11H,6-7H2,1-3H3/p+1
InChIKey: MXTLAHSTUOXGQF-UHFFFAOYSA-O
DeepSMILES: COccc-cccccccc6c[n+]%10CCc%14cc%18O)))))))))OC)))OC
Scaffold Graph/Node/Bond level: c1ccc2c(c1)CC[n+]1cc3ccccc3cc1-2
Scaffold Graph/Node level: C1CCC2CN3CCC4CCCCC4C3CC2C1
Scaffold Graph level: C1CCC2CC3C(CCC4CCCCC43)CC2C1
Functional groups: cOC; c[n+](c)C; cO
Chemical classification
ClassyFire Kingdom: Organic compounds
ClassyFire Superclass: Alkaloids and derivatives
ClassyFire Class: Protoberberine alkaloids and derivatives
Synonymous chemical names:
jatrorhizine, jateorrhizine, Jatrorrhizine, jatrorrhizine
External chemical identifiers:
CID:CID_72323; ChEMBL:CHEMBL251055; ChEBI:CHEBI:6087; ZINC:ZINC000000338122; FDASRS:091S1F8V5Q; SureChEMBL:SCHEMBL564128; MolPort-003-804-059
Chemical structure download


Jatrorrhizine
Physicochemical properties
Property name Tool Property value
Molecular weight (g/mol) RDKit 338.38
Log P RDKit 3.08
Topological polar surface area (Å2) RDKit 51.8
Number of hydrogen bond acceptors RDKit 4
Number of hydrogen bond donors RDKit 1
Number of carbon atoms RDKit 20
Number of heavy atoms RDKit 25
Number of heteroatoms RDKit 5
Number of nitrogen atoms RDKit 1
Number of sulfur atoms RDKit 0
Number of chiral carbon atoms RDKit 0
Stereochemical complexity RDKit 0
Number of sp hybridized carbon atoms RDKit 0
Number of sp2 hybridized carbon atoms RDKit 15
Number of sp3 hybridized carbon atoms RDKit 5
Shape complexity RDKit 0.25
Number of rotatable bonds RDKit 3
Number of aliphatic carbocycles RDKit 0
Number of aliphatic heterocycles RDKit 1
Number of aliphatic rings RDKit 1
Number of aromatic carbocycles RDKit 2
Number of aromatic heterocycles RDKit 1
Number of aromatic rings RDKit 3
Total number of rings RDKit 4
Number of saturated carbocycles RDKit 0
Number of saturated heterocycles RDKit 0
Number of saturated rings RDKit 0
Number of Smallest Set of Smallest Rings (SSSR) RDKit 4


Jatrorrhizine
Drug-likeness
Property nameToolProperty value
Number of Lipinski’s rule of 5 violations RDKit 0
Lipinski’s rule of 5 filter RDKit Passed
Number of Ghose filter violations RDKit 0
Ghose filter RDKit Passed
Veber filter RDKit Good
Pfizer 3/75 filter RDKit Bad
GSK 4/400 filter RDKit Good
Weighted quantitative estimate of drug-likeness (QEDw) score RDKit 0.745861


Jatrorrhizine
ADME properties
Property nameToolProperty value
Bioavailability score SwissADME 0.55
Solubility class [ESOL] SwissADME Moderately soluble
Solubility class [Silicos-IT] SwissADME Moderately soluble
Blood Brain Barrier permeation SwissADME Yes
Gastrointestinal absorption SwissADME High
Log Kp (Skin permeation, cm/s) SwissADME -5.94
Number of PAINS structural alerts SwissADME 0
Number of Brenk structural alerts SwissADME 1
CYP1A2 inhibitor SwissADME Yes
CYP2C19 inhibitor SwissADME No
CYP2C9 inhibitor SwissADME No
CYP2D6 inhibitor SwissADME Yes
CYP3A4 inhibitor SwissADME Yes
P-glycoprotein substrate SwissADME Yes


Jatrorrhizine
Phytochemical - Human target proteins supported by experimental evidence associations
Human target proteins supported by experimental evidence
IMPPAT target identifierGene identifierHGNC symbolEntrez Gene identifierSource
TAR_EXP_000280ENSG00000160868CYP3A41576BindingDB, ChEMBL, NPASS
TAR_EXP_000860ENSG00000152601MBNL14154NPASS
TAR_EXP_000853ENSG00000276155MAPT4137NPASS
TAR_EXP_000833ENSG00000160789LMNA4000NPASS
TAR_EXP_000819ENSG00000235268KDM4E390245NPASS
TAR_EXP_000608ENSG00000115419GLS2744NPASS
TAR_EXP_000567ENSG00000177628GBA12629NPASS
TAR_EXP_000519ENSG00000171298GAA2548NPASS
TAR_EXP_001206ENSG00000042088TDP155775NPASS
TAR_EXP_000433ENSG00000168496FEN12237NPASS
TAR_EXP_001341ENSG00000002016RAD525893ChEMBL, NPASS
TAR_EXP_000119ENSG00000101751POLI11201NPASS
TAR_EXP_000095ENSG00000224143EHMT210919NPASS
TAR_EXP_001150ENSG00000070501POLB5423NPASS
TAR_EXP_001547ENSG00000275349SMN16606NPASS
TAR_EXP_000450ENSG00000004487KDM1A23028BindingDB, ChEMBL